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Journal of Cellular Physiology|November 25, 2014
The role of Notch receptors in transcriptional regulationHongfang Wang, Chongzhi Zang, X Shirley Liu, et al.
BMC Genomics|April 17, 2008
xMAN: extreme MApping of OligoNucleotidesWei Li, Jason S Carroll, Myles Brown, et al.
Methods in Molecular Biology (Clifton, N.J.)|March 4, 2020
Computational Deconvolution of Tumor-Infiltrating Immune Components with Bulk Tumor Gene Expression DataBo Li, Taiwen Li, Jun S Liu, et al.
Bioinformatics (Oxford, England)|May 10, 2011
BINOCh: binding inference from nucleosome occupancy changesClifford A Meyer, Housheng H He, Myles Brown, et al.
Bioinformatics (Oxford, England)|June 7, 2012
DiNuP: a systematic approach to identify regions of differential nucleosome positioningKai Fu, Qianzi Tang, Jianxing Feng, et al.
Quantitative Biology (Beijing, China)|March 6, 2015
Computational methodology for ChIP-seq analysisHyunjin Shin, Tao Liu, Xikun Duan, et al.
Genome Research|May 11, 2023
Efficient and accurate KIR and HLA genotyping with massively parallel sequencing dataLi Song, Gali Bai, X Shirley Liu, et al.
Nucleic Acids Research|July 18, 2006
CEAS: cis-regulatory element annotation systemXuwo Ji, Wei Li, Jun Song, et al.
Nature Biotechnology|January 16, 2007
High-throughput mapping of the chromatin structure of human promotersFatih Ozsolak, Jun S Song, X Shirley Liu, et al.
Proceedings of the National Academy of Sciences of the United States of America|March 11, 2003
Integrating regulatory motif discovery and genome-wide expression analysisErin M Conlon, X Shirley Liu, Jason D Lieb, et al.
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