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BMC Genomics
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September 13, 2019
Deciphering epigenomic code for cell differentiation using deep learning
Pengyu Ni, Zhengchang Su
NAR Genomics and Bioinformatics
|
June 23, 2021
Accurate prediction of <i>cis</i>-regulatory modules reveals a prevalent regulatory genome of humans
Pengyu Ni, Zhengchang Su
Database : the Journal of Biological Databases and Curation
|
April 22, 2022
PCRMS: a database of predicted cis-regulatory modules and constituent transcription factor binding sites in genomes
Pengyu Ni, Zhengchang Su
BMC Biology
|
July 14, 2025
Prediction of target genes and functional types of cis-regulatory modules in the human genome reveals their distinct properties
Sisi Yuan, Pengyu Ni, Zhengchang Su
Advanced Genetics (Hoboken, N.J.)
|
June 17, 2024
Validated Negative Regions (VNRs) in the VISTA Database might be Truncated Forms of Bona Fide Enhancers
Pengyu Ni, Siwen Wu, Zhengchang Su
NAR Genomics and Bioinformatics
|
September 25, 2023
Underlying causes for prevalent false positives and false negatives in STARR-seq data
Pengyu Ni, Siwen Wu, Zhengchang Su
BMC Biology
|
October 5, 2022
Accurate prediction of functional states of cis-regulatory modules reveals common epigenetic rules in humans and mice
Pengyu Ni, Joshua Moe, Zhengchang Su
BMC Genomics
|
October 19, 2022
A map of cis-regulatory modules and constituent transcription factor binding sites in 80% of the mouse genome
Pengyu Ni, David Wilson, Zhengchang Su
Nucleic Acids Research
|
January 12, 2024
Less-is-more: selecting transcription factor binding regions informative for motif inference
Jinrui Xu, Jiahao Gao, Pengyu Ni, et al.
Nucleic Acids Research
|
May 8, 2018
Towards a map of cis-regulatory sequences in the human genome
Meng Niu, Ehsan Tabari, Pengyu Ni, et al.
Page
of 3
Search research articles
Search
Showing results (1-10 of 25) with videos related to
Sort By:
Page
of 3
BMC Genomics
|
September 13, 2019
Deciphering epigenomic code for cell differentiation using deep learning
Pengyu Ni, Zhengchang Su
NAR Genomics and Bioinformatics
|
June 23, 2021
Accurate prediction of <i>cis</i>-regulatory modules reveals a prevalent regulatory genome of humans
Pengyu Ni, Zhengchang Su
Database : the Journal of Biological Databases and Curation
|
April 22, 2022
PCRMS: a database of predicted cis-regulatory modules and constituent transcription factor binding sites in genomes
Pengyu Ni, Zhengchang Su
BMC Biology
|
July 14, 2025
Prediction of target genes and functional types of cis-regulatory modules in the human genome reveals their distinct properties
Sisi Yuan, Pengyu Ni, Zhengchang Su
Advanced Genetics (Hoboken, N.J.)
|
June 17, 2024
Validated Negative Regions (VNRs) in the VISTA Database might be Truncated Forms of Bona Fide Enhancers
Pengyu Ni, Siwen Wu, Zhengchang Su
NAR Genomics and Bioinformatics
|
September 25, 2023
Underlying causes for prevalent false positives and false negatives in STARR-seq data
Pengyu Ni, Siwen Wu, Zhengchang Su
BMC Biology
|
October 5, 2022
Accurate prediction of functional states of cis-regulatory modules reveals common epigenetic rules in humans and mice
Pengyu Ni, Joshua Moe, Zhengchang Su
BMC Genomics
|
October 19, 2022
A map of cis-regulatory modules and constituent transcription factor binding sites in 80% of the mouse genome
Pengyu Ni, David Wilson, Zhengchang Su
Nucleic Acids Research
|
January 12, 2024
Less-is-more: selecting transcription factor binding regions informative for motif inference
Jinrui Xu, Jiahao Gao, Pengyu Ni, et al.
Nucleic Acids Research
|
May 8, 2018
Towards a map of cis-regulatory sequences in the human genome
Meng Niu, Ehsan Tabari, Pengyu Ni, et al.
Page
of 3