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Journal of the American Chemical Society|October 1, 2019
Multiple Binding Configurations of Fis Protein Pairs on DNA: Facilitated Dissociation versus Cooperative DissociationMin-Yeh Tsai, Weihua Zheng, Mingchen Chen, et al.Proceedings of the National Academy of Sciences of the United States of America|October 5, 2016
Exploring the aggregation free energy landscape of the amyloid-β protein (1-40)Weihua Zheng, Min-Yeh Tsai, Mingchen Chen, et al.Nucleic Acids Research|October 6, 2021
Single-molecule conformational dynamics of a transcription factor reveals a continuum of binding modes controlling association and dissociationWei Chen, Wei Lu, Peter G Wolynes, et al.The Journal of Physical Chemistry. B|August 6, 2021
Glass Dynamics Deep in the Energy LandscapeMark D Ediger, Martin Gruebele, Vassiliy Lubchenko, et al.Proceedings of the National Academy of Sciences of the United States of America|February 23, 2023
Surface crossing and energy flow in many-dimensional quantum systemsChenghao Zhang, Martin Gruebele, David E Logan, et al.Methods (San Diego, Calif.)|June 22, 2010
Protein structure prediction: do hydrogen bonding and water-mediated interactions suffice?Vanessa Oklejas, Chenghang Zong, Garegin A Papoian, et al.Journal of Molecular Biology|June 9, 2004
The folding and dimerization of HIV-1 protease: evidence for a stable monomer from simulationsYaakov Levy, Amedeo Caflisch, Jose N Onuchic, et al.ACS Chemical Neuroscience|December 16, 2017
The Associative Memory, Water Mediated, Structure and Energy Model (AWSEM)-Amylometer: Predicting Amyloid Propensity and Fibril Topology Using an Optimized Folding Landscape ModelMingchen Chen, Nicholas P Schafer, Weihua Zheng, et al.Journal of the American Chemical Society|September 30, 2016
Molecular Mechanism of Facilitated Dissociation of Fis Protein from DNAMin-Yeh Tsai, Bin Zhang, Weihua Zheng, et al.The Journal of Physical Chemistry. B|April 2, 2008
Variationally determined free energy profiles for structural models of proteins: characteristic temperatures for folding and trappingTongye Shen, Chenghang Zong, John J Portman, et al.Pageof 23