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Proceedings of the National Academy of Sciences of the United States of America|February 10, 2016
Topological constraints and modular structure in the folding and functional motions of GlpG, an intramembrane proteaseNicholas P Schafer, Ha H Truong, Daniel E Otzen, et al.Proceedings of the National Academy of Sciences of the United States of America|November 1, 2017
De novo prediction of human chromosome structures: Epigenetic marking patterns encode genome architectureMichele Di Pierro, Ryan R Cheng, Erez Lieberman Aiden, et al.The Journal of Physical Chemistry. B|May 2, 2012
AWSEM-MD: protein structure prediction using coarse-grained physical potentials and bioinformatically based local structure biasingAram Davtyan, Nicholas P Schafer, Weihua Zheng, et al.Proceedings of the National Academy of Sciences of the United States of America|February 16, 2019
Local frustration around enzyme active sitesMaria I Freiberger, A Brenda Guzovsky, Peter G Wolynes, et al.Journal of the American Chemical Society|August 5, 2025
Intersegment Transfer and the Dynamical Architecture of Fis Protein-DNA Multimer ComplexesXun Chen, Shikai Jin, Cheng-Han Liu, et al.Journal of Chemical Theory and Computation|September 22, 2018
Template-Guided Protein Structure Prediction and Refinement Using Optimized Folding Landscape Force FieldsMingchen Chen, Xingcheng Lin, Wei Lu, et al.Proceedings of the National Academy of Sciences of the United States of America|August 20, 2024
Predicting protein conformational motions using energetic frustration analysis and AlphaFold2Xingyue Guan, Qian-Yuan Tang, Weitong Ren, et al.Nucleic Acids Research|May 31, 2012
Protein frustratometer: a tool to localize energetic frustration in protein moleculesMichael Jenik, R Gonzalo Parra, Leandro G Radusky, et al.ACS Chemical Neuroscience|May 18, 2019
Steady, Symmetric, and Reversible Growth and Dissolution of Individual Amyloid-β FibrilsYuechuan Xu, Mohammad S Safari, Wenchuan Ma, et al.Proceedings of the National Academy of Sciences of the United States of America|February 16, 2007
Establishing the entatic state in folding metallated Pseudomonas aeruginosa azurinChenghang Zong, Corey J Wilson, Tongye Shen, et al.Pageof 23