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The Journal of Physical Chemistry. B|July 3, 2009
Energy flow and long-range correlations in guanine-binding riboswitch: a nonequilibrium molecular dynamics studyPhuong H Nguyen, Philippe Derreumaux, Gerhard StockThe Journal of Chemical Physics|July 24, 2010
Infrared signatures of the peptide dynamical transition: a molecular dynamics simulation studyMaja Kobus, Phuong H Nguyen, Gerhard StockThe Journal of Physical Chemistry Letters|December 10, 2015
Scaling Rules for Vibrational Energy Transport in Globular ProteinsSebastian Buchenberg, David M Leitner, Gerhard StockThe Journal of Chemical Physics|May 27, 2008
Maximum Caliber: a variational approach applied to two-state dynamicsGerhard Stock, Kingshuk Ghosh, Ken A DillThe Journal of Chemical Physics|April 5, 2011
Coherent vibrational energy transfer along a peptide helixMaja Kobus, Phuong H Nguyen, Gerhard StockProteins|November 3, 2004
Energy landscape of a small peptide revealed by dihedral angle principal component analysisYuguang Mu, Phuong H Nguyen, Gerhard StockThe Journal of Physical Chemistry. B|December 24, 2009
Free-energy landscape of RNA hairpins constructed via dihedral angle principal component analysisLaura Riccardi, Phuong H Nguyen, Gerhard StockProteins|June 25, 2005
Structure and energy landscape of a photoswitchable peptide: a replica exchange molecular dynamics studyPhuong H Nguyen, Yuguang Mu, Gerhard StockJournal of Chemical Theory and Computation|November 25, 2015
Construction of the Free Energy Landscape of Peptide Aggregation from Molecular Dynamics SimulationsLaura Riccardi, Phuong H Nguyen, Gerhard StockThe Journal of Physical Chemistry Letters|April 10, 2018
Machine Learning of Biomolecular Reaction CoordinatesSimon Brandt, Florian Sittel, Matthias Ernst, et al.Pageof 26