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Bioinformatics (Oxford, England)|November 30, 2017
SAPP: functional genome annotation and analysis through a semantic framework using FAIR principlesJasper J Koehorst, Jesse C J van Dam, Edoardo Saccenti, et al.Journal of Fungi (Basel, Switzerland)|April 28, 2023
Identification of Aspergillus niger Aquaporins Involved in Hydrogen Peroxide SignalingThanaporn Laothanachareon, Enrique Asin-Garcia, Rita J M Volkers, et al.BMC Microbiology|January 7, 2021
A metabolic and physiological design study of Pseudomonas putida KT2440 capable of anaerobic respirationLinde F C Kampers, Jasper J Koehorst, Ruben J A van Heck, et al.Computational and Structural Biotechnology Journal|November 26, 2020
Modeling a co-culture of Clostridium autoethanogenum and Clostridium kluyveri to increase syngas conversion to medium-chain fatty-acidsSara Benito-Vaquerizo, Martijn Diender, Ivette Parera Olm, et al.The Journal of Biological Chemistry|January 25, 2007
Oxaloacetate hydrolase, the C-C bond lyase of oxalate secreting fungiYing Han, Henk-Jan Joosten, Weiling Niu, et al.Frontiers in Cellular and Infection Microbiology|February 23, 2017
Persistence of Functional Protein Domains in Mycoplasma Species and their Role in Host Specificity and Synthetic Minimal LifeTjerko Kamminga, Jasper J Koehorst, Paul Vermeij, et al.Scientific Data|November 6, 2019
The Empusa code generator and its application to GBOL, an extendable ontology for genome annotationJesse C J van Dam, Jasper J Koehorst, Jon Olav Vik, et al.Microbial Cell Factories|June 16, 2022
Genome-scale metabolic modelling enables deciphering ethanol metabolism via the acrylate pathway in the propionate-producer Anaerotignum neopropionicumSara Benito-Vaquerizo, Ivette Parera Olm, Thijs de Vroet, et al.Biochimica Et Biophysica Acta|June 29, 2014
A genomic view on syntrophic versus non-syntrophic lifestyle in anaerobic fatty acid degrading communitiesPetra Worm, Jasper J Koehorst, Michael Visser, et al.BMC Genomics|January 7, 2011
An iterative workflow for mining the human intestinal metaproteomeKoos Rooijers, Carolin Kolmeder, Catherine Juste, et al.Pageof 12