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Petr Stadlbauer

Showing results (1-10 of 41) with videos related to

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Journal of Chemical Information and Modeling|July 17, 2023
Complexity of Guanine Quadruplex Unfolding Pathways Revealed by Atomistic Pulling SimulationsPetr Stadlbauer, Vojtěch Mlýnský, Miroslav Krepl, et al.
Nucleic Acids Research|September 9, 2025
RNA G-quadruplexes emerge from a compacted coil-like ensemble via multiple pathwaysPavlína Pokorná, Vojtěch Mlýnský, Jiří Šponer, et al.
Journal of Chemical Information and Modeling|April 17, 2024
Mechanical Stability and Unfolding Pathways of Parallel Tetrameric G-Quadruplexes Probed by Pulling SimulationsZhengyue Zhang, Vojtěch Mlýnský, Miroslav Krepl, et al.
Nucleic Acids Research|December 1, 2022
Spontaneous binding of single-stranded RNAs to RRM proteins visualized by unbiased atomistic simulations with a rescaled RNA force fieldMiroslav Krepl, Pavlína Pokorná, Vojtěch Mlýnský, et al.
International Journal of Biological Macromolecules|January 29, 2024
Molecular dynamics simulations reveal the parallel stranded d(GGGA)<sub>3</sub>GGG DNA quadruplex folds via multiple paths from a coil-like ensemblePavlína Pokorná, Vojtěch Mlýnský, Giovanni Bussi, et al.
Journal of Computational Chemistry|January 27, 2025
Atomistic Insights Into Interaction of Doxorubicin With DNA: From Duplex to NucleosomeAndrea Nedělníková, Petr Stadlbauer, Michal Otyepka, et al.
Journal of Chemical Theory and Computation|June 29, 2017
Effect of Monovalent Ion Parameters on Molecular Dynamics Simulations of G-QuadruplexesMarek Havrila, Petr Stadlbauer, Barira Islam, et al.
The Journal of Physical Chemistry. B|February 27, 2016
Can We Execute Reliable MM-PBSA Free Energy Computations of Relative Stabilities of Different Guanine Quadruplex Folds?Barira Islam, Petr Stadlbauer, Stephen Neidle, et al.
Journal of Chemical Theory and Computation|February 21, 2018
Correction to "Effect of Monovalent Ion Parameters on Molecular Dynamics Simulations of G-Quadruplexes"Marek Havrila, Petr Stadlbauer, Barira Islam, et al.
Biochimie|July 20, 2014
Triplex intermediates in folding of human telomeric quadruplexes probed by microsecond-scale molecular dynamics simulationsPetr Stadlbauer, Lukáš Trantírek, Thomas E Cheatham, et al.
Pageof 5

Showing results (1-10 of 41) with videos related to

Sort By:
Pageof 5
Journal of Chemical Information and Modeling|July 17, 2023
Complexity of Guanine Quadruplex Unfolding Pathways Revealed by Atomistic Pulling SimulationsPetr Stadlbauer, Vojtěch Mlýnský, Miroslav Krepl, et al.
Nucleic Acids Research|September 9, 2025
RNA G-quadruplexes emerge from a compacted coil-like ensemble via multiple pathwaysPavlína Pokorná, Vojtěch Mlýnský, Jiří Šponer, et al.
Journal of Chemical Information and Modeling|April 17, 2024
Mechanical Stability and Unfolding Pathways of Parallel Tetrameric G-Quadruplexes Probed by Pulling SimulationsZhengyue Zhang, Vojtěch Mlýnský, Miroslav Krepl, et al.
Nucleic Acids Research|December 1, 2022
Spontaneous binding of single-stranded RNAs to RRM proteins visualized by unbiased atomistic simulations with a rescaled RNA force fieldMiroslav Krepl, Pavlína Pokorná, Vojtěch Mlýnský, et al.
International Journal of Biological Macromolecules|January 29, 2024
Molecular dynamics simulations reveal the parallel stranded d(GGGA)<sub>3</sub>GGG DNA quadruplex folds via multiple paths from a coil-like ensemblePavlína Pokorná, Vojtěch Mlýnský, Giovanni Bussi, et al.
Journal of Computational Chemistry|January 27, 2025
Atomistic Insights Into Interaction of Doxorubicin With DNA: From Duplex to NucleosomeAndrea Nedělníková, Petr Stadlbauer, Michal Otyepka, et al.
Journal of Chemical Theory and Computation|June 29, 2017
Effect of Monovalent Ion Parameters on Molecular Dynamics Simulations of G-QuadruplexesMarek Havrila, Petr Stadlbauer, Barira Islam, et al.
The Journal of Physical Chemistry. B|February 27, 2016
Can We Execute Reliable MM-PBSA Free Energy Computations of Relative Stabilities of Different Guanine Quadruplex Folds?Barira Islam, Petr Stadlbauer, Stephen Neidle, et al.
Journal of Chemical Theory and Computation|February 21, 2018
Correction to "Effect of Monovalent Ion Parameters on Molecular Dynamics Simulations of G-Quadruplexes"Marek Havrila, Petr Stadlbauer, Barira Islam, et al.
Biochimie|July 20, 2014
Triplex intermediates in folding of human telomeric quadruplexes probed by microsecond-scale molecular dynamics simulationsPetr Stadlbauer, Lukáš Trantírek, Thomas E Cheatham, et al.
Pageof 5