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Journal of Chemical Information and Modeling|October 31, 2007
Lossless compression of chemical fingerprints using integer entropy codes improves storage and retrievalPierre Baldi, Ryan W Benz, Daniel S Hirschberg, et al.Journal of Chemical Information and Modeling|June 5, 2008
Discovery of power-laws in chemical spaceRyan W Benz, S Joshua Swamidass, Pierre BaldiJournal of Chemical Information and Modeling|April 21, 2007
Mathematical correction for fingerprint similarity measures to improve chemical retrievalS Joshua Swamidass, Pierre BaldiJournal of Chemical Information and Modeling|March 1, 2007
Bounds and algorithms for fast exact searches of chemical fingerprints in linear and sublinear timeS Joshua Swamidass, Pierre BaldiBioinformatics (Oxford, England)|July 1, 2008
BLASTing small molecules--statistics and extreme statistics of chemical similarity scoresPierre Baldi, Ryan W BenzJournal of Chemical Information and Modeling|July 16, 2009
An intersection inequality sharper than the tanimoto triangle inequality for efficiently searching large databasesPierre Baldi, Daniel S HirschbergBioinformatics (Oxford, England)|April 10, 2010
A CROC stronger than ROC: measuring, visualizing and optimizing early retrievalS Joshua Swamidass, Chloé-Agathe Azencott, Kenny Daily, et al.Journal of Chemical Information and Modeling|August 5, 2010
Hashing algorithms and data structures for rapid searches of fingerprint vectorsRamzi Nasr, Daniel S Hirschberg, Pierre BaldiBioinformatics (Oxford, England)|September 22, 2005
ChemDB: a public database of small molecules and related chemoinformatics resourcesJonathan Chen, S Joshua Swamidass, Yimeng Dou, et al.A&A Practice|August 12, 2025
Domain Knowledge Inclusive Monotonic Neural Network Guides Patient-Specific Induction of General Anesthesia DosingKathryn Sarullo, Muntaha Samad, Samir Kendale, et al.Pageof 34