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Bioinformatics (Oxford, England)|October 11, 2022
GTDB-Tk v2: memory friendly classification with the genome taxonomy databasePierre-Alain Chaumeil, Aaron J Mussig, Philip Hugenholtz, et al.Bioinformatics (Oxford, England)|November 16, 2019
GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy DatabasePierre-Alain Chaumeil, Aaron J Mussig, Philip Hugenholtz, et al.Nature Microbiology|May 22, 2019
Evaluation of a concatenated protein phylogeny for classification of tailed double-stranded DNA viruses belonging to the order CaudoviralesSoo Jen Low, Mária Džunková, Pierre-Alain Chaumeil, et al.Nature Biotechnology|September 5, 2020
Author Correction: A complete domain-to-species taxonomy for Bacteria and ArchaeaDonovan H Parks, Maria Chuvochina, Pierre-Alain Chaumeil, et al.Nucleic Acids Research|October 22, 2025
GTDB release 10: a complete and systematic taxonomy for 715 230 bacterial and 17 245 archaeal genomesDonovan H Parks, Pierre-Alain Chaumeil, Aaron J Mussig, et al.Nucleic Acids Research|September 14, 2021
GTDB: an ongoing census of bacterial and archaeal diversity through a phylogenetically consistent, rank normalized and complete genome-based taxonomyDonovan H Parks, Maria Chuvochina, Christian Rinke, et al.Nature Biotechnology|April 29, 2020
A complete domain-to-species taxonomy for Bacteria and ArchaeaDonovan H Parks, Maria Chuvochina, Pierre-Alain Chaumeil, et al.Microbial Genomics|May 29, 2024
Putative genome contamination has minimal impact on the GTDB taxonomyAaron J Mussig, Pierre-Alain Chaumeil, Maria Chuvochina, et al.FEMS Microbiology Letters|July 22, 2023
Proposal of names for 329 higher rank taxa defined in the Genome Taxonomy Database under two prokaryotic codesMaria Chuvochina, Aaron J Mussig, Pierre-Alain Chaumeil, et al.Nature Biotechnology|August 28, 2018
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of lifeDonovan H Parks, Maria Chuvochina, David W Waite, et al.Pageof 2