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IEEE/ACM Transactions on Computational Biology and Bioinformatics|May 18, 2011
A memory efficient method for structure-based RNA multiple alignmentDaniel DeBlasio, Jocelyne Bruand, Shaojie Zhang
International Journal of Bioinformatics Research and Applications|July 4, 2014
Discovering non-coding RNA elements in Drosophila 3' untranslated regionsCuncong Zhong, Justen Andrews, Shaojie Zhang
BMC Bioinformatics|June 7, 2019
Multi-allelic positional Burrows-Wheeler transformArdalan Naseri, Degui Zhi, Shaojie Zhang
Biorxiv : the Preprint Server for Biology|November 28, 2023
Fast and accurate local ancestry inference with Recomb-MixYuan Wei, Degui Zhi, Shaojie Zhang
Bioinformatics (Oxford, England)|February 24, 2021
d-PBWT: dynamic positional Burrows-Wheeler transformAhsan Sanaullah, Degui Zhi, Shaojie Zhang
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|April 7, 2006
Consensus folding of unaligned RNA sequences revisitedVineet Bafna, Haixu Tang, Shaojie Zhang
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