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BMC Bioinformatics|May 31, 2020
BEAVR: a browser-based tool for the exploration and visualization of RNA-seq dataPirunthan Perampalam, Frederick A DickPlos One|December 18, 2024
GO-CRISPR: A highly controlled workflow to discover gene essentiality in loss-of-function screensPirunthan Perampalam, James I McDonald, Frederick A DickNature Communications|November 3, 2022
A comprehensive Bioconductor ecosystem for the design of CRISPR guide RNAs across nucleases and technologiesLuke Hoberecht, Pirunthan Perampalam, Aaron Lun, et al.Molecular Cancer Research : MCR|December 30, 2016
A Systematic Analysis of Negative Growth Control Implicates the DREAM Complex in Cancer Cell DormancyJames MacDonald, Yudith Ramos-Valdes, Pirunthan Perampalam, et al.The Journal of Clinical Investigation|January 14, 2021
Disrupting the DREAM transcriptional repressor complex induces apolipoprotein overexpression and systemic amyloidosis in micePirunthan Perampalam, Haider M Hassan, Grace E Lilly, et al.Biorxiv : the Preprint Server for Biology|September 26, 2025
The DREAM complex links somatic mutation, lifespan, and diseaseZane Koch, Shuvro P Nandi, Kate Licon, et al.Nature Aging|June 2, 2026
DREAM repressive activity links somatic mutation, lifespan and diseaseZane Koch, Shuvro P Nandi, Kate Licon, et al.Elife|July 18, 2024
Netrin signaling mediates survival of dormant epithelial ovarian cancer cellsPirunthan Perampalam, James I MacDonald, Komila Zakirova, et al.Cell Chemical Biology|December 6, 2023
Potent and selective binders of the E3 ubiquitin ligase ZNRF3 stimulate Wnt signaling and intestinal organoid growthYvonne T Kschonsak, Xinxin Gao, Stephen E Miller, et al.Pageof 1