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Current Opinion in Biotechnology|December 3, 2014
How metabolites modulate metabolic fluxAndre Wegner, Johannes Meiser, Daniel Weindl, et al.Journal of Chromatography. A|March 10, 2015
Isotopologue ratio normalization for non-targeted metabolomicsDaniel Weindl, André Wegner, Christian Jäger, et al.Briefings in Bioinformatics|July 6, 2019
Closing the gap between formats for storing layout information in systems biologyDavid Hoksza, Piotr Gawron, Marek Ostaszewski, et al.Philosophical Transactions. Series A, Mathematical, Physical, and Engineering Sciences|April 2, 2025
Assessment of uncertainty quantification in universal differential equationsNina Schmid, David Fernandes Del Pozo, Willem Waegeman, et al.Bioinformatics (Oxford, England)|January 2, 2017
Parameter estimation for dynamical systems with discrete events and logical operationsFabian Fröhlich, Fabian J Theis, Joachim O Rädler, et al.Cell Systems|May 7, 2018
A Hierarchical, Data-Driven Approach to Modeling Single-Cell Populations Predicts Latent Causes of Cell-To-Cell VariabilityCarolin Loos, Katharina Moeller, Fabian Fröhlich, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|October 12, 2022
Assessment of Prediction Uncertainty Quantification Methods in Systems BiologyAlejandro F Villaverde, Elba Raimundez, Jan Hasenauer, et al.Plos One|July 13, 2026
Assessment of simulation-based inference methods for stochastic compartmental models in epidemiological researchVincent Wieland, Nils Waßmuth, Lorenzo Contento, et al.Analytical Chemistry|March 22, 2013
Isotope cluster-based compound matching in gas chromatography/mass spectrometry for non-targeted metabolomicsAndré Wegner, Sean C Sapcariu, Daniel Weindl, et al.BMC Systems Biology|August 24, 2016
Tailored parameter optimization methods for ordinary differential equation models with steady-state constraintsAnna Fiedler, Sebastian Raeth, Fabian J Theis, et al.Pageof 17