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Arxiv|November 28, 2024
Integrating Secondary Structures Information into Triangular Spatial Relationships (TSR) for Advanced Protein ClassificationPoorya Khajouie, Titli Sarkar, Krishna Rauniyar, et al.
IEEE Transactions on Computational Biology and Bioinformatics|January 14, 2026
SSE-TSR: An Approach to Integrate Secondary Structure Elements into Triangular Spatial Relationships for Protein ClassificationPoorya Khajouie, Titli Sarkar, Krishna Rauniyar, et al.
Computational Biology and Chemistry|June 9, 2024
Development of a novel representation of drug 3D structures and enhancement of the TSR-based method for probing drug and target interactionsTarikul I Milon, Yuhong Wang, Ryan L Fontenot, et al.
Proteins|June 19, 2025
Development of a Novel Method for Representing 3D Structures of Nucleotides Using the Concept of the TSR Algorithm and Evaluation of the Method Through Studying Specific Interactions Between DNAs and p53Krishna Rauniyar, Tarikul I Milon, Poorya Khajouie, et al.
Methods in Molecular Biology (Clifton, N.J.)|November 1, 2025
Quantification of Conformational Changes of Kinase Regulators, Kinases, and Regulator-Kinase Complexes Using the TSR AlgorithmTarikul I Milon, Poorya Khajouie, Feng Chen, et al.
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