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Analytical Chemistry|February 20, 2019
Multiplexed Relative Quantitation with Isobaric Tagging Mass Spectrometry Reveals Class I Major Histocompatibility Complex Ligand Dynamics in Response to DoxorubicinJ Patrick Murphy, Qijia Yu, Prathyusha Konda, et al.Frontiers in Immunology|February 23, 2023
After virus exposure, early bystander naïve CD8 T cell activation relies on NAD+ salvage metabolismNamit Holay, Barry E Kennedy, J Patrick Murphy, et al.Biorxiv : the Preprint Server for Biology|August 1, 2025
Dual Inhibition of CDK4/6 and mTORC1 Establishes a Preclinical Strategy for Translocation Renal Cell CarcinomaShikha Gupta, Prateek Khanna, Eddy Saad, et al.Journal of Proteome Research|August 4, 2017
Quantitative Temporal in Vivo Proteomics Deciphers the Transition of Virus-Driven Myeloid Cells into M2 MacrophagesDerek R Clements, John Patrick Murphy, Andra Sterea, et al.Molecular Therapy Oncolytics|March 14, 2022
NAD+ depletion enhances reovirus-induced oncolysis in multiple myelomaBarry E Kennedy, Michael Giacomantonio, J Patrick Murphy, et al.Biorxiv : the Preprint Server for Biology|September 5, 2025
Phenotypic screening converges on CDK9 inhibition as a therapeutic strategy in translocation renal cell carcinomaDharma R Thapa, Riva Deodhar, Adam Skepner, et al.Biorxiv : the Preprint Server for Biology|August 14, 2023
A genetic basis for cancer sex differences revealed in Xp11 translocation renal cell carcinomaMingkee Achom, Ananthan Sadagopan, Chunyang Bao, et al.Cell|August 21, 2024
A genetic basis for sex differences in Xp11 translocation renal cell carcinomaMingkee Achom, Ananthan Sadagopan, Chunyang Bao, et al.Biorxiv : the Preprint Server for Biology|September 15, 2025
Fusion-driven oncogenic programs shape the immune landscape in translocation renal cell carcinomaPrathyusha Konda, Cary N Weiss, Yantong Cui, et al.Biorxiv : the Preprint Server for Biology|September 15, 2025
Detection and monitoring of translocation renal cell carcinoma via plasma cell-free epigenomic profilingSimon Garinet, Karl Semaan, Jiao Li, et al.Pageof 4