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The Journal of Physical Chemistry. A|June 19, 2009
The hydrolysis activity of adenosine triphosphate in myosin: a theoretical analysis of anomeric effects and the nature of the transition stateYang Yang, Qiang CuiProteins|November 19, 2016
Microscopic mechanisms that govern the titration response and pKa values of buried residues in staphylococcal nuclease mutantsYuqing Zheng, Qiang CuiJournal of the American Chemical Society|December 5, 2003
What is so special about Arg 55 in the catalysis of cyclophilin A? insights from hybrid QM/MM simulationsGuohui Li, Qiang CuiThe Journal of Physical Chemistry. B|September 19, 2012
Implementation of the solvent macromolecule boundary potential and application to model and realistic enzyme systemsJan Zienau, Qiang CuiProtein Science : a Publication of the Protein Society|June 19, 2008
Allostery and cooperativity revisitedQiang Cui, Martin KarplusBiochemistry|February 4, 2025
Impact of Fluctuations in the Peridinin-Chlorophyll a-Protein on the Energy Transfer: Insights from Classical and QM/MM Molecular Dynamics SimulationsMonja Sokolov, Qiang CuiSTAR Protocols|March 1, 2025
Protocol to calculate the climate effects of the global aviation industry using the Aviation-FAIR modelQiang Cui, Ying ZhouThe Journal of Physical Chemistry. B|January 26, 2013
Charging free energy calculations using the Generalized Solvent Boundary Potential (GSBP) and periodic boundary condition: a comparative analysis using ion solvation and oxidation free energy in proteinsXiya Lu, Qiang CuiBiophysical Journal|January 22, 2013
Three-dimensional stress field around a membrane protein: atomistic and coarse-grained simulation analysis of gramicidin AJejoong Yoo, Qiang CuiBiophysical Journal|January 22, 2013
Membrane-mediated protein-protein interactions and connection to elastic models: a coarse-grained simulation analysis of gramicidin A associationJejoong Yoo, Qiang CuiPageof 56