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Nature Methods|March 13, 2026
stVCR: spatiotemporal dynamics of single cellsQiangwei Peng, Peijie Zhou, Tiejun LiNPJ Systems Biology and Applications|December 4, 2025
Deciphering cell-fate trajectories using spatiotemporal single-cell transcriptomic dataZhenyi Zhang, Zihan Wang, Yuhao Sun, et al.The Journal of Chemical Physics|October 27, 2016
Response to "Comment on 'Construction of the landscape for multi-stable systems: Potential landscape, quasi-potential, A-type integral and beyond"' [J. Chem. Phys. 145, 147104 (2016)]Peijie Zhou, Tiejun LiThe Journal of Chemical Physics|March 10, 2016
Construction of the landscape for multi-stable systems: Potential landscape, quasi-potential, A-type integral and beyondPeijie Zhou, Tiejun LiPlos Computational Biology|November 18, 2024
Storm: Incorporating transient stochastic dynamics to infer the RNA velocity with metabolic labeling informationQiangwei Peng, Xiaojie Qiu, Tiejun LiNature Communications|September 24, 2021
Dissecting transition cells from single-cell transcriptome data through multiscale stochastic dynamicsPeijie Zhou, Shuxiong Wang, Tiejun Li, et al.Nature Methods|May 16, 2024
Spatial transition tensor of single cellsPeijie Zhou, Federico Bocci, Tiejun Li, et al.Briefings in Bioinformatics|September 23, 2021
Integrating single-cell datasets with ambiguous batch information by incorporating molecular network featuresJi Dong, Peijie Zhou, Yichong Wu, et al.Complex & Intelligent Systems|June 26, 2023
A new multi-attribute decision making approach based on new score function and hybrid weighted score measure in interval-valued Fermatean fuzzy environmentHongwu Qin, Qiangwei Peng, Xiuqin Ma, et al.Nucleic Acids Research|April 7, 2023
exFINDER: identify external communication signals using single-cell transcriptomics dataChanghan He, Peijie Zhou, Qing NiePageof 46