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The Journal of Physical Chemistry. B|January 22, 2010
pH-dependent pKa values in proteins--a theoretical analysis of protonation energies with practical consequences for enzymatic reactionsElisa Bombarda, G Matthias UllmannJournal of Molecular Modeling|July 24, 2009
McVol - a program for calculating protein volumes and identifying cavities by a Monte Carlo algorithmMirco S Till, G Matthias UllmannJournal of Chemical Theory and Computation|November 17, 2023
Virtual Model Compound Approach for Calculating Redox Potentials of [Fe2S2]-Cys4 Centers in Proteins - Structure Quality MattersRajeev Ranjan Roy, G Matthias UllmannJournal of Chemical Theory and Computation|November 18, 2015
CoMoDo: identifying dynamic protein domains based on covariances of motionSilke A Wieninger, G Matthias UllmannBiochemistry|September 29, 2004
Negatively charged residues and hydrogen bonds tune the ligand histidine pKa values of Rieske iron-sulfur proteinsAstrid R Klingen, G Matthias UllmannBiophysical Chemistry|August 16, 2012
Molecular dynamics simulation of HIV-1 fusion domain-membrane complexes: Insight into the N-terminal gp41 fusion mechanismSiriporn Promsri, G Matthias Ullmann, Supot HannongbuaProteins|October 26, 2005
Electrostatic potential at the retinal of three archaeal rhodopsins: implications for their different absorption spectraEdda Kloppmann, Torsten Becker, G Matthias UllmannJournal of Mathematical Biology|February 28, 2012
A mathematical view on the decoupled sites representationJohannes W R Martini, G Matthias UllmannJournal of Computational Chemistry|May 2, 2007
An extended dead-end elimination algorithm to determine gap-free lists of low energy statesEdda Kloppmann, G Matthias Ullmann, Torsten BeckerJournal of the American Chemical Society|September 14, 2006
Influence of the membrane potential on the protonation of bacteriorhodopsin: insights from electrostatic calculations into the regulation of proton pumpingElisa Bombarda, Torsten Becker, G Matthias UllmannPageof 9