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Plos Computational Biology
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February 23, 2021
Hybridized distance- and contact-based hierarchical structure modeling for folding soluble and membrane proteins
Rahmatullah Roche, Sutanu Bhattacharya, Debswapna Bhattacharya
Biorxiv : the Preprint Server for Biology
|
August 2, 2024
Single-sequence protein-RNA complex structure prediction by geometric attention-enabled pairing of biological language models
Rahmatullah Roche, Sumit Tarafder, Debswapna Bhattacharya
Proceedings of the National Academy of Sciences of the United States of America
|
July 31, 2023
The transformative power of transformers in protein structure prediction
Bernard Moussad, Rahmatullah Roche, Debswapna Bhattacharya
Cell Systems
|
September 17, 2025
Single-sequence protein-RNA complex structure prediction by geometric attention-enabled pairing of biological language models
Rahmatullah Roche, Sumit Tarafder, Debswapna Bhattacharya
Biology Methods & Protocols
|
July 15, 2024
The landscape of RNA 3D structure modeling with transformer networks
Sumit Tarafder, Rahmatullah Roche, Debswapna Bhattacharya
STAR Protocols
|
April 19, 2026
A protocol for single-sequence protein-RNA complex structure prediction using ProRNA3D-single
Rahmatullah Roche, Sumit Tarafder, Debswapna Bhattacharya
Proteins
|
October 2, 2021
DisCovER: distance- and orientation-based covariational threading for weakly homologous proteins
Sutanu Bhattacharya, Rahmatullah Roche, Bernard Moussad, et al.
Methods in Molecular Biology (Clifton, N.J.)
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July 2, 2025
Advances in Language-Model-Informed Protein-Nucleic Acid Binding Site Prediction
Sumit Tarafder, Xinyu Wang, Rahmatullah Roche, et al.
Proteins
|
June 25, 2022
rrQNet: Protein contact map quality estimation by deep evolutionary reconciliation
Rahmatullah Roche, Sutanu Bhattacharya, Md Hossain Shuvo, et al.
Plos One
|
December 3, 2020
PolyFold: An interactive visual simulator for distance-based protein folding
Andrew J McGehee, Sutanu Bhattacharya, Rahmatullah Roche, et al.
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of 2
Search research articles
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Showing results (1-10 of 18) with videos related to
Sort By:
Page
of 2
Plos Computational Biology
|
February 23, 2021
Hybridized distance- and contact-based hierarchical structure modeling for folding soluble and membrane proteins
Rahmatullah Roche, Sutanu Bhattacharya, Debswapna Bhattacharya
Biorxiv : the Preprint Server for Biology
|
August 2, 2024
Single-sequence protein-RNA complex structure prediction by geometric attention-enabled pairing of biological language models
Rahmatullah Roche, Sumit Tarafder, Debswapna Bhattacharya
Proceedings of the National Academy of Sciences of the United States of America
|
July 31, 2023
The transformative power of transformers in protein structure prediction
Bernard Moussad, Rahmatullah Roche, Debswapna Bhattacharya
Cell Systems
|
September 17, 2025
Single-sequence protein-RNA complex structure prediction by geometric attention-enabled pairing of biological language models
Rahmatullah Roche, Sumit Tarafder, Debswapna Bhattacharya
Biology Methods & Protocols
|
July 15, 2024
The landscape of RNA 3D structure modeling with transformer networks
Sumit Tarafder, Rahmatullah Roche, Debswapna Bhattacharya
STAR Protocols
|
April 19, 2026
A protocol for single-sequence protein-RNA complex structure prediction using ProRNA3D-single
Rahmatullah Roche, Sumit Tarafder, Debswapna Bhattacharya
Proteins
|
October 2, 2021
DisCovER: distance- and orientation-based covariational threading for weakly homologous proteins
Sutanu Bhattacharya, Rahmatullah Roche, Bernard Moussad, et al.
Methods in Molecular Biology (Clifton, N.J.)
|
July 2, 2025
Advances in Language-Model-Informed Protein-Nucleic Acid Binding Site Prediction
Sumit Tarafder, Xinyu Wang, Rahmatullah Roche, et al.
Proteins
|
June 25, 2022
rrQNet: Protein contact map quality estimation by deep evolutionary reconciliation
Rahmatullah Roche, Sutanu Bhattacharya, Md Hossain Shuvo, et al.
Plos One
|
December 3, 2020
PolyFold: An interactive visual simulator for distance-based protein folding
Andrew J McGehee, Sutanu Bhattacharya, Rahmatullah Roche, et al.
Page
of 2