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Journal of Medicinal Chemistry|September 11, 2015
OpenGrowth: An Automated and Rational Algorithm for Finding New Protein LigandsNicolas Chéron, Naveen Jasty, Eugene I ShakhnovichProteins|March 3, 2011
The ensemble folding kinetics of the FBP28 WW domain revealed by an all-atom Monte Carlo simulation in a knowledge-based potentialJiabin Xu, Lei Huang, Eugene I ShakhnovichJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|February 6, 2009
Systems-level evidence of transcriptional co-regulation of yeast protein complexesJ William Lee, Tomasz Zemojtel, Eugene ShakhnovichProteins|July 2, 2003
Side-chain dynamics and protein foldingEdo Kussell, Jun Shimada, Eugene I ShakhnovichJournal of Molecular Biology|July 27, 2001
Excluded volume in protein side-chain packingE Kussell, J Shimada, E I ShakhnovichACS Central Science|February 27, 2023
Thermal Half-Lives of Azobenzene Derivatives: Virtual Screening Based on Intersystem Crossing Using a Machine Learning PotentialSimon Axelrod, Eugene Shakhnovich, Rafael Gómez-BombarelliJournal of Chemical Information and Modeling|September 6, 2023
Mapping the Space of Photoswitchable Ligands and Photodruggable Proteins with Computational ModelingSimon Axelrod, Eugene Shakhnovich, Rafael Gómez-BombarelliProceedings of the National Academy of Sciences of the United States of America|April 12, 2002
A structure-based method for derivation of all-atom potentials for protein foldingEdo Kussell, Jun Shimada, Eugene I ShakhnovichMolecular Biology and Evolution|October 15, 2013
Contribution of selection for protein folding stability in shaping the patterns of polymorphisms in coding regionsAdrian W R Serohijos, Eugene I ShakhnovichCurrent Opinion in Structural Biology|June 22, 2014
Merging molecular mechanism and evolution: theory and computation at the interface of biophysics and evolutionary population geneticsAdrian W R Serohijos, Eugene I ShakhnovichPageof 626