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Plos Computational Biology|July 18, 2014
A novel nutritional predictor links microbial fastidiousness with lowered ubiquity, growth rate, and cooperativenessRaphy Zarecki, Matthew A Oberhardt, Leah Reshef, et al.Environmental Microbiology|October 4, 2016
Diet-induced changes of redox potential underlie compositional shifts in the rumen archaeal communityNir Friedman, Eran Shriker, Ben Gold, et al.Proceedings of the National Academy of Sciences of the United States of America|November 8, 2013
Computational evaluation of cellular metabolic costs successfully predicts genes whose expression is deleteriousAllon Wagner, Raphy Zarecki, Leah Reshef, et al.Nature Communications|October 14, 2015
Harnessing the landscape of microbial culture media to predict new organism-media pairingsMatthew A Oberhardt, Raphy Zarecki, Sabine Gronow, et al.Plos One|May 31, 2024
The MISOPRED score: Development and validation of a clinical scoring system to predict the effectiveness of Misoprostol treatment for early pregnancy lossTomer Bar-Noy, Ofer Limonad, Erika Gandelsman, et al.Mbio|August 14, 2014
Glycan degradation (GlyDeR) analysis predicts mammalian gut microbiota abundance and host diet-specific adaptationsOmer Eilam, Raphy Zarecki, Matthew Oberhardt, et al.Msystems|August 1, 2022
Modeling-Guided Amendments Lead to Enhanced Biodegradation in SoilKusum Dhakar, Raphy Zarecki, Shlomit Medina, et al.Nature Communications|December 14, 2011
Competitive and cooperative metabolic interactions in bacterial communitiesShiri Freilich, Raphy Zarecki, Omer Eilam, et al.Scientific Reports|August 5, 2020
Genome-scale reconstruction of Paenarthrobacter aurescens TC1 metabolic model towards the study of atrazine bioremediationShany Ofaim, Raphy Zarecki, Seema Porob, et al.Frontiers in Plant Science|March 26, 2015
Improved evidence-based genome-scale metabolic models for maize leaf, embryo, and endospermSamuel M D Seaver, Louis M T Bradbury, Océane Frelin, et al.Pageof 2