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Molecular Biology and Evolution|July 13, 2023
Likelihood-Based Tests of Species Tree HypothesesRichard Adams, Michael DeGiorgioSystematic Biology|November 30, 2023
Robust Phylogenetic RegressionRichard Adams, Zoe Cain, Raquel Assis, et al.BMC Ecology and Evolution|October 16, 2025
Robust regression rescues poor phylogenetic decisionsMataya Duncan, Michael DeGiorgio, Raquel Assis, et al.Molecular Biology and Evolution|February 11, 2025
A Tale of Too Many Trees: A Conundrum for Phylogenetic RegressionRichard Adams, Jenniffer Roa Lozano, Mataya Duncan, et al.Bioinformatics Advances|January 6, 2025
TraitTrainR: accelerating large-scale simulation under models of continuous trait evolutionJenniffer Roa Lozano, Mataya Duncan, Duane D McKenna, et al.Molecular Biology and Evolution|October 12, 2020
Learning Retention Mechanisms and Evolutionary Parameters of Duplicate Genes from Their Expression DataMichael DeGiorgio, Raquel AssisMolecular Biology and Evolution|November 1, 2018
Detection of Shared Balancing Selection in the Absence of Trans-Species PolymorphismXiaoheng Cheng, Michael DeGiorgioBioinformatics (Oxford, England)|October 19, 2021
BalLeRMix +: mixture model approaches for robust joint identification of both positive selection and long-term balancing selectionXiaoheng Cheng, Michael DeGiorgioGenes|April 3, 2021
Understanding the Adaptive Evolutionary Histories of South American Ancient and Present-Day Populations via GenomicsJohn Lindo, Michael DeGiorgioMolecular Biology and Evolution|May 29, 2020
Flexible Mixture Model Approaches That Accommodate Footprint Size Variability for Robust Detection of Balancing SelectionXiaoheng Cheng, Michael DeGiorgioPageof 22