Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Filters

Rob Patro

Showing results (31-40 of 76) with videos related to

Pageof 8
Sort By:
Bioinformatics (Oxford, England)|June 29, 2018
A space and time-efficient index for the compacted colored de Bruijn graphFatemeh Almodaresi, Hirak Sarkar, Avi Srivastava, et al.
Algorithms for Molecular Biology : AMB|May 29, 2014
Identification of alternative topological domains in chromatinDarya Filippova, Rob Patro, Geet Duggal, et al.
Genome Biology|September 8, 2022
Scalable, ultra-fast, and low-memory construction of compacted de Bruijn graphs with Cuttlefish 2Jamshed Khan, Marek Kokot, Sebastian Deorowicz, et al.
Iscience|June 28, 2023
TreeTerminus -creating transcript trees using inferential replicate countsNoor Pratap Singh, Michael I Love, Rob Patro
Bioinformatics (Oxford, England)|July 14, 2020
A Bayesian framework for inter-cellular information sharing improves dscRNA-seq quantificationAvi Srivastava, Laraib Malik, Hirak Sarkar, et al.
Bioinformatics (Oxford, England)|September 9, 2017
Improved data-driven likelihood factorizations for transcript abundance estimationMohsen Zakeri, Avi Srivastava, Fatemeh Almodaresi, et al.
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|October 9, 2024
Where the Patterns Are: Repetition-Aware Compression for Colored de Bruijn Graphs<sup></sup>Alessio Campanelli, Giulio Ermanno Pibiri, Jason Fan, et al.
Bioinformatics (Oxford, England)|September 9, 2017
deBGR: an efficient and near-exact representation of the weighted de Bruijn graphPrashant Pandey, Michael A Bender, Rob Johnson, et al.
Biorxiv : the Preprint Server for Biology|July 19, 2024
Where the patterns are: repetition-aware compression for colored de Bruijn graphs <sup>⋆</sup>Alessio Campanelli, Giulio Ermanno Pibiri, Jason Fan, et al.
Plos Computational Biology|January 11, 2021
Preprocessing choices affect RNA velocity results for droplet scRNA-seq dataCharlotte Soneson, Avi Srivastava, Rob Patro, et al.
Pageof 8

Showing results (31-40 of 76) with videos related to

Sort By:
Pageof 8
Bioinformatics (Oxford, England)|June 29, 2018
A space and time-efficient index for the compacted colored de Bruijn graphFatemeh Almodaresi, Hirak Sarkar, Avi Srivastava, et al.
Algorithms for Molecular Biology : AMB|May 29, 2014
Identification of alternative topological domains in chromatinDarya Filippova, Rob Patro, Geet Duggal, et al.
Genome Biology|September 8, 2022
Scalable, ultra-fast, and low-memory construction of compacted de Bruijn graphs with Cuttlefish 2Jamshed Khan, Marek Kokot, Sebastian Deorowicz, et al.
Iscience|June 28, 2023
TreeTerminus -creating transcript trees using inferential replicate countsNoor Pratap Singh, Michael I Love, Rob Patro
Bioinformatics (Oxford, England)|July 14, 2020
A Bayesian framework for inter-cellular information sharing improves dscRNA-seq quantificationAvi Srivastava, Laraib Malik, Hirak Sarkar, et al.
Bioinformatics (Oxford, England)|September 9, 2017
Improved data-driven likelihood factorizations for transcript abundance estimationMohsen Zakeri, Avi Srivastava, Fatemeh Almodaresi, et al.
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|October 9, 2024
Where the Patterns Are: Repetition-Aware Compression for Colored de Bruijn Graphs<sup></sup>Alessio Campanelli, Giulio Ermanno Pibiri, Jason Fan, et al.
Bioinformatics (Oxford, England)|September 9, 2017
deBGR: an efficient and near-exact representation of the weighted de Bruijn graphPrashant Pandey, Michael A Bender, Rob Johnson, et al.
Biorxiv : the Preprint Server for Biology|July 19, 2024
Where the patterns are: repetition-aware compression for colored de Bruijn graphs <sup>⋆</sup>Alessio Campanelli, Giulio Ermanno Pibiri, Jason Fan, et al.
Plos Computational Biology|January 11, 2021
Preprocessing choices affect RNA velocity results for droplet scRNA-seq dataCharlotte Soneson, Avi Srivastava, Rob Patro, et al.
Pageof 8