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Journal of Molecular Modeling
|
September 11, 2019
Ewald-based methods for Gaussian integral evaluation: application to a new parameterization of GEM
Robert E Duke, G Andrés Cisneros
The Journal of Chemical Physics
|
August 3, 2015
A new smoothing function to introduce long-range electrostatic effects in QM/MM calculations
Dong Fang, Robert E Duke, G Andrés Cisneros
Theoretical Chemistry Accounts
|
April 4, 2017
Long-range electrostatic corrections in multipolar/polarizable QM/MM simulations
Eric G Kratz, Robert E Duke, G Andrés Cisneros
The Journal of Physical Chemistry. B
|
September 24, 2010
Simulations of a protein crystal with a high resolution X-ray structure: evaluation of force fields and water models
David S Cerutti, Lydia Freddolino, Robert E Duke, et al.
Journal of Chemical Theory and Computation
|
February 23, 2010
Staggered Mesh Ewald: An extension of the Smooth Particle-Mesh Ewald method adding great versatility
David S Cerutti, Robert E Duke, Thomas A Darden, et al.
Journal of Chemical Theory and Computation
|
November 19, 2015
GEM*: A Molecular Electronic Density-Based Force Field for Molecular Dynamics Simulations
Robert E Duke, Oleg N Starovoytov, Jean-Philip Piquemal, et al.
Thrombosis Research
|
February 17, 2010
Recent estimates of the structure of the factor VIIa (FVIIa)/tissue factor (TF) and factor Xa (FXa) ternary complex
Chang Jun Lee, Vasu Chandrasekaran, Sangwook Wu, et al.
Protein Science : a Publication of the Protein Society
|
May 22, 2008
Computational study of the putative active form of protein Z (PZa): sequence design and structural modeling
Vasu Chandrasekaran, Chang Jun Lee, Robert E Duke, et al.
Journal of Molecular Modeling
|
January 28, 2009
A computational modeling and molecular dynamics study of the Michaelis complex of human protein Z-dependent protease inhibitor (ZPI) and factor Xa (FXa)
Vasudevan Chandrasekaran, Chang Jun Lee, Ping Lin, et al.
Journal of Computational Chemistry
|
April 29, 2009
Trypsin-ligand binding free energies from explicit and implicit solvent simulations with polarizable potential
Dian Jiao, Jiajing Zhang, Robert E Duke, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 11) with videos related to
Sort By:
Page
of 2
Journal of Molecular Modeling
|
September 11, 2019
Ewald-based methods for Gaussian integral evaluation: application to a new parameterization of GEM
Robert E Duke, G Andrés Cisneros
The Journal of Chemical Physics
|
August 3, 2015
A new smoothing function to introduce long-range electrostatic effects in QM/MM calculations
Dong Fang, Robert E Duke, G Andrés Cisneros
Theoretical Chemistry Accounts
|
April 4, 2017
Long-range electrostatic corrections in multipolar/polarizable QM/MM simulations
Eric G Kratz, Robert E Duke, G Andrés Cisneros
The Journal of Physical Chemistry. B
|
September 24, 2010
Simulations of a protein crystal with a high resolution X-ray structure: evaluation of force fields and water models
David S Cerutti, Lydia Freddolino, Robert E Duke, et al.
Journal of Chemical Theory and Computation
|
February 23, 2010
Staggered Mesh Ewald: An extension of the Smooth Particle-Mesh Ewald method adding great versatility
David S Cerutti, Robert E Duke, Thomas A Darden, et al.
Journal of Chemical Theory and Computation
|
November 19, 2015
GEM*: A Molecular Electronic Density-Based Force Field for Molecular Dynamics Simulations
Robert E Duke, Oleg N Starovoytov, Jean-Philip Piquemal, et al.
Thrombosis Research
|
February 17, 2010
Recent estimates of the structure of the factor VIIa (FVIIa)/tissue factor (TF) and factor Xa (FXa) ternary complex
Chang Jun Lee, Vasu Chandrasekaran, Sangwook Wu, et al.
Protein Science : a Publication of the Protein Society
|
May 22, 2008
Computational study of the putative active form of protein Z (PZa): sequence design and structural modeling
Vasu Chandrasekaran, Chang Jun Lee, Robert E Duke, et al.
Journal of Molecular Modeling
|
January 28, 2009
A computational modeling and molecular dynamics study of the Michaelis complex of human protein Z-dependent protease inhibitor (ZPI) and factor Xa (FXa)
Vasudevan Chandrasekaran, Chang Jun Lee, Ping Lin, et al.
Journal of Computational Chemistry
|
April 29, 2009
Trypsin-ligand binding free energies from explicit and implicit solvent simulations with polarizable potential
Dian Jiao, Jiajing Zhang, Robert E Duke, et al.
Page
of 2