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Genome Research|December 3, 2004
Computing prokaryotic gene ubiquity: rescuing the core from extinctionRobert L Charlebois, W Ford DoolittleTrends in Microbiology|January 18, 2006
Ancient lateral gene transfer in the evolution of Bdellovibrio bacteriovorusUri Gophna, Robert L Charlebois, W Ford DoolittleJournal of Bacteriology|February 3, 2005
Weighted genome trees: refinements and applicationsUri Gophna, W Ford Doolittle, Robert L CharleboisSystematic Biology|December 17, 2008
The impact of reticulate evolution on genome phylogenyRobert G Beiko, W Ford Doolittle, Robert L CharleboisGenome Research|August 11, 2006
Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer eventsOlga Zhaxybayeva, J Peter Gogarten, Robert L Charlebois, et al.Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences|July 3, 2009
The practice of classification and the theory of evolution, and what the demise of Charles Darwin's tree of life hypothesis means for both of themW Ford DoolittleCold Spring Harbor Perspectives in Biology|June 4, 2014
How natural a kind is "eukaryote?"W Ford DoolittleCurrent Biology : CB|July 9, 2008
Microbial evolution: stalking the wild bacterial speciesW Ford DoolittleProceedings of the National Academy of Sciences of the United States of America|March 13, 2013
Is junk DNA bunk? A critique of ENCODEW Ford DoolittlePageof 11