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Molecular Biology and Evolution
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December 12, 2019
Linking Branch Lengths across Sets of Loci Provides the Highest Statistical Support for Phylogenetic Inference
David A Duchêne, K Jun Tong, Charles S P Foster, et al.
Biorxiv : the Preprint Server for Biology
|
October 7, 2020
Ultrafast Sample Placement on Existing Trees (UShER) Empowers Real-Time Phylogenetics for the SARS-CoV-2 Pandemic
Yatish Turakhia, Bryan Thornlow, Angie S Hinrichs, et al.
Systematic Biology
|
February 8, 2011
Bayesian estimation of substitution rates from ancient DNA sequences with low information content
Simon Y W Ho, Robert Lanfear, Matthew J Phillips, et al.
Nature Genetics
|
May 11, 2021
Ultrafast Sample placement on Existing tRees (UShER) enables real-time phylogenetics for the SARS-CoV-2 pandemic
Yatish Turakhia, Bryan Thornlow, Angie S Hinrichs, et al.
Bioinformatics (Oxford, England)
|
June 22, 2022
matOptimize: a parallel tree optimization method enables online phylogenetics for SARS-CoV-2
Cheng Ye, Bryan Thornlow, Angie Hinrichs, et al.
Biorxiv : the Preprint Server for Biology
|
May 25, 2022
Online Phylogenetics using Parsimony Produces Slightly Better Trees and is Dramatically More Efficient for Large SARS-CoV-2 Phylogenies than <i>de novo</i> and Maximum-Likelihood Approaches
Bryan Thornlow, Alexander Kramer, Cheng Ye, et al.
Systematic Biology
|
May 26, 2023
Online Phylogenetics with matOptimize Produces Equivalent Trees and is Dramatically More Efficient for Large SARS-CoV-2 Phylogenies than de novo and Maximum-Likelihood Implementations
Alexander M Kramer, Bryan Thornlow, Cheng Ye, et al.
Molecular Biology and Evolution
|
August 19, 2024
GTRpmix: A Linked General Time-Reversible Model for Profile Mixture Models
Hector Banos, Thomas K F Wong, Justin Daneau, et al.
Nature
|
August 11, 2022
Pandemic-scale phylogenomics reveals the SARS-CoV-2 recombination landscape
Yatish Turakhia, Bryan Thornlow, Angie Hinrichs, et al.
Biorxiv : the Preprint Server for Biology
|
June 29, 2026
GTRspmix: Capturing Heterogeneity of Exchangeabilities Across Sites to Improve Protein Phylogenetics
Ryo Harada, Edward Susko, Thomas K F Wong, et al.
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Search research articles
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Showing results (71-80 of 90) with videos related to
Sort By:
Page
of 9
Molecular Biology and Evolution
|
December 12, 2019
Linking Branch Lengths across Sets of Loci Provides the Highest Statistical Support for Phylogenetic Inference
David A Duchêne, K Jun Tong, Charles S P Foster, et al.
Biorxiv : the Preprint Server for Biology
|
October 7, 2020
Ultrafast Sample Placement on Existing Trees (UShER) Empowers Real-Time Phylogenetics for the SARS-CoV-2 Pandemic
Yatish Turakhia, Bryan Thornlow, Angie S Hinrichs, et al.
Systematic Biology
|
February 8, 2011
Bayesian estimation of substitution rates from ancient DNA sequences with low information content
Simon Y W Ho, Robert Lanfear, Matthew J Phillips, et al.
Nature Genetics
|
May 11, 2021
Ultrafast Sample placement on Existing tRees (UShER) enables real-time phylogenetics for the SARS-CoV-2 pandemic
Yatish Turakhia, Bryan Thornlow, Angie S Hinrichs, et al.
Bioinformatics (Oxford, England)
|
June 22, 2022
matOptimize: a parallel tree optimization method enables online phylogenetics for SARS-CoV-2
Cheng Ye, Bryan Thornlow, Angie Hinrichs, et al.
Biorxiv : the Preprint Server for Biology
|
May 25, 2022
Online Phylogenetics using Parsimony Produces Slightly Better Trees and is Dramatically More Efficient for Large SARS-CoV-2 Phylogenies than <i>de novo</i> and Maximum-Likelihood Approaches
Bryan Thornlow, Alexander Kramer, Cheng Ye, et al.
Systematic Biology
|
May 26, 2023
Online Phylogenetics with matOptimize Produces Equivalent Trees and is Dramatically More Efficient for Large SARS-CoV-2 Phylogenies than de novo and Maximum-Likelihood Implementations
Alexander M Kramer, Bryan Thornlow, Cheng Ye, et al.
Molecular Biology and Evolution
|
August 19, 2024
GTRpmix: A Linked General Time-Reversible Model for Profile Mixture Models
Hector Banos, Thomas K F Wong, Justin Daneau, et al.
Nature
|
August 11, 2022
Pandemic-scale phylogenomics reveals the SARS-CoV-2 recombination landscape
Yatish Turakhia, Bryan Thornlow, Angie Hinrichs, et al.
Biorxiv : the Preprint Server for Biology
|
June 29, 2026
GTRspmix: Capturing Heterogeneity of Exchangeabilities Across Sites to Improve Protein Phylogenetics
Ryo Harada, Edward Susko, Thomas K F Wong, et al.
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