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Genome Research|September 8, 2012
GENCODE: the reference human genome annotation for The ENCODE ProjectJennifer Harrow, Adam Frankish, Jose M Gonzalez, et al.Nature Biotechnology|May 20, 2014
A unified test of linkage analysis and rare-variant association for analysis of pedigree sequence dataHao Hu, Jared C Roach, Hilary Coon, et al.Nature|September 24, 2025
The Biodiversity Cell Atlas: mapping the tree of life at cellular resolutionArnau Sebé-Pedrós, Amos Tanay, Mara K N Lawniczak, et al.Biorxiv : the Preprint Server for Biology|January 7, 2025
An Expanded Registry of Candidate cis-Regulatory Elements for Studying Transcriptional RegulationJill E Moore, Henry E Pratt, Kaili Fan, et al.Science (New York, N.Y.)|September 11, 2020
The impact of sex on gene expression across human tissuesMeritxell Oliva, Manuel Muñoz-Aguirre, Sarah Kim-Hellmuth, et al.Biorxiv : the Preprint Server for Biology|November 28, 2023
An encyclopedia of enhancer-gene regulatory interactions in the human genomeAndreas R Gschwind, Kristy S Mualim, Alireza Karbalayghareh, et al.Biorxiv : the Preprint Server for Biology|June 9, 2023
The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversityFairlie Reese, Brian Williams, Gabriela Balderrama-Gutierrez, et al.Genome Medicine|October 14, 2021
Artificial intelligence enables comprehensive genome interpretation and nomination of candidate diagnoses for rare genetic diseasesFrancisco M De La Vega, Shimul Chowdhury, Barry Moore, et al.Biorxiv : the Preprint Server for Biology|November 18, 2024
GENCODE: massively expanding the lncRNA catalog through capture long-read RNA sequencingGazaldeep Kaur, Tamara Perteghella, Sílvia Carbonell-Sala, et al.Nature|January 7, 2026
An expanded registry of candidate cis-regulatory elementsJill E Moore, Henry E Pratt, Kaili Fan, et al.Pageof 22