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Nucleic Acids Research|April 21, 2016
Jointly characterizing epigenetic dynamics across multiple human cell typesYu Zhang, Lin An, Feng Yue, et al.Annual Review of Genomics and Human Genetics|October 16, 2004
Comparative genomicsWebb Miller, Kateryna D Makova, Anton Nekrutenko, et al.Genome Research|June 15, 2007
A framework for collaborative analysis of ENCODE data: making large-scale analyses biologist-friendlyDaniel Blankenberg, James Taylor, Ian Schenck, et al.Bioinformatics (Oxford, England)|March 8, 2021
S3V2-IDEAS: a package for normalizing, denoising and integrating epigenomic datasets across different cell typesGuanjue Xiang, Belinda M Giardine, Shaun Mahony, et al.Genome Research|March 3, 2004
zPicture: dynamic alignment and visualization tool for analyzing conservation profilesIvan Ovcharenko, Gabriela G Loots, Ross C Hardison, et al.Genome Research|September 20, 2005
Galaxy: a platform for interactive large-scale genome analysisBelinda Giardine, Cathy Riemer, Ross C Hardison, et al.Genome Research|January 17, 2003
Cross-species sequence comparisons: a review of methods and available resourcesKelly A Frazer, Laura Elnitski, Deanna M Church, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|September 30, 2010
An effective method for detecting gene conversion events in whole genomesChih-Hao Hsu, Yu Zhang, Ross C Hardison, et al.Genome Research|December 14, 2004
Evolution and functional classification of vertebrate gene desertsIvan Ovcharenko, Gabriela G Loots, Marcelo A Nobrega, et al.Genome Research|January 19, 2022
Domain-adaptive neural networks improve cross-species prediction of transcription factor bindingKelly Cochran, Divyanshi Srivastava, Avanti Shrikumar, et al.Pageof 44