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BMC Systems Biology|January 4, 2013
Mining functional subgraphs from cancer protein-protein interaction networksRu Shen, Nalin C W Goonesekere, Chittibabu GudaPlos One|April 18, 2014
A meta analysis of pancreatic microarray datasets yields new targets as cancer genes and biomarkersNalin C W Goonesekere, Xiaosheng Wang, Lindsey Ludwig, et al.Biomed Research International|May 7, 2014
Applied graph-mining algorithms to study biomolecular interaction networksRu Shen, Chittibabu GudaBiomed Research International|October 24, 2015
Discovering distinct functional modules of specific cancer types using protein-protein interaction networksRu Shen, Xiaosheng Wang, Chittibabu GudaNucleic Acids Research|May 25, 2004
Frequency of gaps observed in a structurally aligned protein pair database suggests a simple gap penalty functionNalin C W Goonesekere, Byungkook LeeProteins|November 16, 2007
Context-specific amino acid substitution matrices and their use in the detection of protein homologsNalin C W Goonesekere, Byungkook LeeComputational Biology and Chemistry|June 12, 2010
The challenge of annotating protein sequences: The tale of eight domains of unknown function in PfamNalin C W Goonesekere, Krysten Shipely, Kevin O'ConnorNucleic Acids Research|July 18, 2006
pTARGET: a web server for predicting protein subcellular localizationChittibabu GudaJournal of Cancer Research and Clinical Oncology|December 31, 2017
Identification of genes highly downregulated in pancreatic cancer through a meta-analysis of microarray datasets: implications for discovery of novel tumor-suppressor genes and therapeutic targetsNalin C W Goonesekere, Wyatt Andersen, Alex Smith, et al.Microbiology Spectrum|June 29, 2022
Meta-Analysis of Altered Gut Microbiota Reveals Microbial and Metabolic Biomarkers for Colorectal CancerNagavardhini Avuthu, Chittibabu GudaPageof 38