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BMC Bioinformatics|March 23, 2021
Weighted minimum feedback vertex sets and implementation in human cancer genes detectionRuiming Li, Chun-Yu Lin, Wei-Feng Guo, et al.
Journal of Bioinformatics and Computational Biology|July 11, 2019
Deep learning with evolutionary and genomic profiles for identifying cancer subtypesChun-Yu Lin, Peiying Ruan, Ruiming Li, et al.
BMC Bioinformatics|February 11, 2021
ReCGBM: a gradient boosting-based method for predicting human dicer cleavage sitesPengyu Liu, Jiangning Song, Chun-Yu Lin, et al.
BMC Bioinformatics|November 1, 2022
Densest subgraph-based methods for protein-protein interaction hot spot predictionRuiming Li, Jung-Yu Lee, Jinn-Moon Yang, et al.
Briefings in Bioinformatics|November 12, 2019
Network control principles for identifying personalized driver genes in cancerWei-Feng Guo, Shao-Wu Zhang, Tao Zeng, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics|April 20, 2023
Common Attractors in Multiple Boolean NetworksYu Cao, Wenya Pi, Chun-Yu Lin, et al.
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|August 3, 2004
Efficient extraction of mapping rules of atoms from enzymatic reaction dataTatsuya Akutsu
BMC Systems Biology|September 24, 2008
Origin of structural difference in metabolic networks with respect to temperatureKazuhiro Takemoto, Tatsuya Akutsu
Genes to Cells : Devoted to Molecular & Cellular Mechanisms|December 15, 2025
DiCleavePlus: A Transformer-Based Model to Detect Human Dicer Cleavage Sites Within Cleavage PatternsLixuan Mu, Tatsuya Akutsu
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