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Bioinformatics (Oxford, England)
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January 17, 2024
scMAE: a masked autoencoder for single-cell RNA-seq clustering
Zhaoyu Fang, Ruiqing Zheng, Min Li
Briefings in Bioinformatics
|
July 28, 2022
GLOBE: a contrastive learning-based framework for integrating single-cell transcriptome datasets
Xuhua Yan, Ruiqing Zheng, Min Li
Bioinformatics (Oxford, England)
|
August 16, 2023
scNCL: transferring labels from scRNA-seq to scATAC-seq data with neighborhood contrastive regularization
Xuhua Yan, Ruiqing Zheng, Jinmiao Chen, et al.
Bioinformatics (Oxford, England)
|
February 23, 2023
CLAIRE: contrastive learning-based batch correction framework for better balance between batch mixing and preservation of cellular heterogeneity
Xuhua Yan, Ruiqing Zheng, Fangxiang Wu, et al.
Genomics, Proteomics & Bioinformatics
|
August 4, 2025
ACE: A Versatile Contrastive Learning Framework for Single-cell Mosaic Integration
Xuhua Yan, Jinmiao Chen, Ruiqing Zheng, et al.
Briefings in Bioinformatics
|
September 15, 2023
Inferring single-cell gene regulatory network by non-redundant mutual information
Yanping Zeng, Yongxin He, Ruiqing Zheng, et al.
IEEE Transactions on Computational Biology and Bioinformatics
|
August 14, 2025
SpaNN: Spatial Transcriptomic Data Enhancement Using Deep Neural Network
Siqi Chen, Wenkang Wang, Ruiqing Zheng, et al.
Briefings in Bioinformatics
|
March 17, 2024
scMLC: an accurate and robust multiplex community detection method for single-cell multi-omics data
Yuxuan Chen, Ruiqing Zheng, Jin Liu, et al.
Briefings in Bioinformatics
|
December 25, 2022
Bubble: a fast single-cell RNA-seq imputation using an autoencoder constrained by bulk RNA-seq data
Siqi Chen, Xuhua Yan, Ruiqing Zheng, et al.
Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
|
April 7, 2026
Artificial Intelligence Powers Protein Functional Annotation
Wenkang Wang, Qiurong Yang, Min Zeng, et al.
Page
of 5
Search research articles
Search
Showing results (1-10 of 50) with videos related to
Sort By:
Page
of 5
Bioinformatics (Oxford, England)
|
January 17, 2024
scMAE: a masked autoencoder for single-cell RNA-seq clustering
Zhaoyu Fang, Ruiqing Zheng, Min Li
Briefings in Bioinformatics
|
July 28, 2022
GLOBE: a contrastive learning-based framework for integrating single-cell transcriptome datasets
Xuhua Yan, Ruiqing Zheng, Min Li
Bioinformatics (Oxford, England)
|
August 16, 2023
scNCL: transferring labels from scRNA-seq to scATAC-seq data with neighborhood contrastive regularization
Xuhua Yan, Ruiqing Zheng, Jinmiao Chen, et al.
Bioinformatics (Oxford, England)
|
February 23, 2023
CLAIRE: contrastive learning-based batch correction framework for better balance between batch mixing and preservation of cellular heterogeneity
Xuhua Yan, Ruiqing Zheng, Fangxiang Wu, et al.
Genomics, Proteomics & Bioinformatics
|
August 4, 2025
ACE: A Versatile Contrastive Learning Framework for Single-cell Mosaic Integration
Xuhua Yan, Jinmiao Chen, Ruiqing Zheng, et al.
Briefings in Bioinformatics
|
September 15, 2023
Inferring single-cell gene regulatory network by non-redundant mutual information
Yanping Zeng, Yongxin He, Ruiqing Zheng, et al.
IEEE Transactions on Computational Biology and Bioinformatics
|
August 14, 2025
SpaNN: Spatial Transcriptomic Data Enhancement Using Deep Neural Network
Siqi Chen, Wenkang Wang, Ruiqing Zheng, et al.
Briefings in Bioinformatics
|
March 17, 2024
scMLC: an accurate and robust multiplex community detection method for single-cell multi-omics data
Yuxuan Chen, Ruiqing Zheng, Jin Liu, et al.
Briefings in Bioinformatics
|
December 25, 2022
Bubble: a fast single-cell RNA-seq imputation using an autoencoder constrained by bulk RNA-seq data
Siqi Chen, Xuhua Yan, Ruiqing Zheng, et al.
Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
|
April 7, 2026
Artificial Intelligence Powers Protein Functional Annotation
Wenkang Wang, Qiurong Yang, Min Zeng, et al.
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of 5