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IEEE/ACM Transactions on Computational Biology and Bioinformatics|May 2, 2009
Network-based inference of cancer progression from microarray dataYongjin Park, Stanley Shackney, Russell Schwartz
Bioinformatics (Oxford, England)|June 29, 2018
Deconvolution and phylogeny inference of structural variations in tumor genomic samplesJesse Eaton, Jingyi Wang, Russell Schwartz
Biophysical Journal|October 9, 2007
Exploring the parameter space of complex self-assembly through virus capsid modelsBlake Sweeney, Tiequan Zhang, Russell Schwartz
Plos Computational Biology|October 24, 2017
Automated deconvolution of structured mixtures from heterogeneous tumor genomic dataTheodore Roman, Lu Xie, Russell Schwartz
Journal of Biomedicine & Biotechnology|June 2, 2012
Inference of tumor phylogenies from genomic assays on heterogeneous samplesAyshwarya Subramanian, Stanley Shackney, Russell Schwartz
BMC Genomics|January 29, 2016
Medoidshift clustering applied to genomic bulk tumor dataTheodore Roman, Lu Xie, Russell Schwartz
Algorithms for Molecular Biology : AMB|January 25, 2013
A mixed integer linear programming model to reconstruct phylogenies from single nucleotide polymorphism haplotypes under the maximum parsimony criterionDaniele Catanzaro, Ramamoorthi Ravi, Russell Schwartz
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|May 15, 2023
A Clonal Evolution Simulator for Planning Somatic Evolution StudiesArjun Srivatsa, Haoyun Lei, Russell Schwartz
IEEE/ACM Transactions on Computational Biology and Bioinformatics|January 11, 2014
Novel multisample scheme for inferring phylogenetic markers from whole genome tumor profilesAyshwarya Subramanian, Stanley Shackney, Russell Schwartz
IEEE Transactions on Nanobioscience|October 12, 2007
Investigating scaling effects on virus capsid-like self-assembly using discrete event simulationsTiequan Zhang, Woo Tae Kim, Russell Schwartz
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