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Cancers|March 13, 2024
Modeling the Effect of Spatial Structure on Solid Tumor Evolution and Circulating Tumor DNA CompositionThomas Rachman, David Bartlett, William LaFramboise, et al.Biorxiv : the Preprint Server for Biology|April 8, 2024
Marker selection strategies for circulating tumor DNA guided by phylogenetic inferenceXuecong Fu, Zhicheng Luo, Yueqian Deng, et al.Biorxiv : the Preprint Server for Biology|November 21, 2023
Modeling the effect of spatial structure on solid tumor evolution and ctDNA compositionThomas Rachman, David Bartlett, William Laframboise, et al.Nucleic Acids Research|October 16, 2022
Interpretable deep learning for chromatin-informed inference of transcriptional programs driven by somatic alterations across cancersYifeng Tao, Xiaojun Ma, Drake Palmer, et al.Bioinformatics (Oxford, England)|July 14, 2020
Robust and accurate deconvolution of tumor populations uncovers evolutionary mechanisms of breast cancer metastasisYifeng Tao, Haoyun Lei, Xuecong Fu, et al.Applied Physics Letters|September 7, 2012
Biological colloid engineering: Self-assembly of dipolar ferromagnetic chains in a functionalized biogenic ferrofluidWarren C Ruder, Chia-Pei D Hsu, Brent D Edelman, et al.Molecular Cancer Therapeutics|March 31, 2021
3D Collagen Vascular Tumor-on-a-Chip Mimetics for Dynamic Combinatorial Drug ScreeningLi Wan, Jun Yin, John Skoko, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|October 6, 2021
Joint Clustering of Single-Cell Sequencing and Fluorescence In Situ Hybridization Data for Reconstructing Clonal Heterogeneity in CancersXuecong Fu, Haoyun Lei, Yifeng Tao, et al.Bioinformatics (Oxford, England)|June 27, 2022
Semi-deconvolution of bulk and single-cell RNA-seq data with application to metastatic progression in breast cancerHaoyun Lei, Xiaoyan A Guo, Yifeng Tao, et al.Bioinformatics (Oxford, England)|June 15, 2015
Inferring models of multiscale copy number evolution for single-tumor phylogeneticsSalim Akhter Chowdhury, E Michael Gertz, Darawalee Wangsa, et al.Pageof 12