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Bioinformatics (Oxford, England)|August 28, 2025
Autocycler: long-read consensus assembly for bacterial genomesRyan R Wick, Benjamin P Howden, Timothy P StinearCurrent Opinion in Microbiology|December 12, 2017
Evolution of virulence in Enterococcus faecium, a hospital-adapted opportunistic pathogenWei Gao, Benjamin P Howden, Timothy P StinearInfection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases|April 10, 2013
The evolution of vancomycin intermediate Staphylococcus aureus (VISA) and heterogenous-VISABenjamin P Howden, Anton Y Peleg, Timothy P StinearBriefings in Functional Genomics|February 23, 2013
Functional genomics of Staphylococcus aureusKyra Y L Chua, Timothy P Stinear, Benjamin P HowdenExpert Review of Anti-Infective Therapy|September 15, 2016
Use of bacterial whole-genome sequencing to understand and improve the management of invasive Staphylococcus aureus infectionsStefano G Giulieri, Natasha E Holmes, Timothy P Stinear, et al.Trends in Microbiology|February 21, 2022
Gut microbiome signatures and host colonization with multidrug-resistant bacteriaNicole S Isles, Andre Mu, Jason C Kwong, et al.Microbiology Resource Announcements|January 18, 2023
Improved Genome Sequence of Australian Methicillin-Resistant Staphylococcus aureus Strain JKD6159Ryan R Wick, Louise M Judd, Ian R Monk, et al.Mbio|May 28, 2015
Complete Bypass of Restriction Systems for Major Staphylococcus aureus LineagesIan R Monk, Jai J Tree, Benjamin P Howden, et al.Antimicrobial Agents and Chemotherapy|August 31, 2006
Isolates with low-level vancomycin resistance associated with persistent methicillin-resistant Staphylococcus aureus bacteremiaBenjamin P Howden, Paul D R Johnson, Peter B Ward, et al.Journal of Clinical Microbiology|February 15, 2013
Outbreak investigation using high-throughput genome sequencing within a diagnostic microbiology laboratoryNorelle L Sherry, Jessica L Porter, Torsten Seemann, et al.Pageof 54