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Genome Biology|October 26, 2013
Sequence signatures extracted from proximal promoters can be used to predict distal enhancersLeila Taher, Robin P Smith, Mee J Kim, et al.
Genomics|October 16, 2007
In vivo characterization of human APOA5 haplotypesNadav Ahituv, Jennifer Akiyama, Audrey Chapman-Helleboid, et al.
Genome Biology|August 26, 2021
Absent from DNA and protein: genomic characterization of nullomers and nullpeptides across functional categories and evolutionIlias Georgakopoulos-Soares, Ofer Yizhar-Barnea, Ioannis Mouratidis, et al.
Molecular Biology and Evolution|August 20, 2019
Comparative Genomic Characterization of the Multimammate Mouse Mastomys couchaAaron Hardin, Kimberly A Nevonen, Walter L Eckalbar, et al.
Biorxiv : the Preprint Server for Biology|October 9, 2023
Best practices for perturbation MPRA-a computational evaluation framework of sequence design strategiesJiayi Liu, Tal Ashuach, Fumitaka Inoue, et al.
Scientific Reports|August 10, 2017
Use antibiotics in cell culture with caution: genome-wide identification of antibiotic-induced changes in gene expression and regulationAnn H Ryu, Walter L Eckalbar, Anat Kreimer, et al.
Human Molecular Genetics|November 9, 2013
Functional characterization of SIM1-associated enhancersMee J Kim, Nir Oksenberg, Thomas J Hoffmann, et al.
Nucleic Acids Research|January 31, 2024
Optimizing sequence design strategies for perturbation MPRAs: a computational evaluation frameworkJiayi Liu, Tal Ashuach, Fumitaka Inoue, et al.
Genome Biology|August 14, 2024
Comprehensive network modeling approaches unravel dynamic enhancer-promoter interactions across neural differentiationWilliam DeGroat, Fumitaka Inoue, Tal Ashuach, et al.
Genome Medicine|May 29, 2012
Pharmacogene regulatory elements: from discovery to applicationsRobin P Smith, Ernest T Lam, Svetlana Markova, et al.
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