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Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics|May 21, 2005
Quantum simulation of the heat capacity of waterWataru Shinoda, Motoyuki ShigaJournal of Computational Chemistry|April 30, 2003
Rigid-body dynamics in the isothermal-isobaric ensemble: a test on the accuracy and computational efficiencyWataru Shinoda, Masuhiro MikamiBiophysical Journal|June 25, 2025
Asymmetry and heterogeneity in the plasma membraneTeppei Yamada, Wataru ShinodaThe Journal of Chemical Physics|April 6, 2013
Method of evaluating curvature-dependent elastic parameters for small unilamellar vesicles using molecular dynamics trajectoryTakenobu Nakamura, Wataru ShinodaThe Journal of Physical Chemistry. B|November 16, 2011
Cholesterol effect on water permeability through DPPC and PSM lipid bilayers: a molecular dynamics studyHiroaki Saito, Wataru ShinodaChemical Record (New York, N.Y.)|February 14, 2023
Liquid Structures and Ion Dynamics of Ionic Liquids Viewed from Intermolecular InteractionsSeiji Tsuzuki, Wataru ShinodaJournal of Chemical Information and Modeling|December 29, 2023
pSPICA Force Field Extended for Proteins and PeptidesYusuke Miyazaki, Wataru ShinodaThe Journal of Chemical Physics|October 15, 2005
Calculation of heat capacities of light and heavy water by path-integral molecular dynamicsMotoyuki Shiga, Wataru ShinodaThe Journal of Chemical Physics|December 24, 2015
Observation of helix associations for insertion of a retinal molecule and distortions of helix structures in bacteriorhodopsinRyo Urano, Yuko OkamotoThe Journal of Physical Chemistry. B|May 15, 2021
Analyzing the Role of Surfactants in the Colloidal Stability of Nanoparticles in Oil through Coarse-Grained Molecular Dynamics SimulationsMark Z Griffiths, Wataru ShinodaPageof 12