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NAR Genomics and Bioinformatics|January 9, 2025
vClean: assessing virus sequence contamination in viral genomesRyota Wagatsuma, Yohei Nishikawa, Masahito Hosokawa, et al.ISME Communications|June 9, 2025
Contrasting defense strategies of oligotrophs and copiotrophs revealed by single-cell-resolved virus-host pairing of freshwater bacteriaYusuke Okazaki, Yohei Nishikawa, Ryota Wagatsuma, et al.Journal of Bioscience and Bioengineering|November 2, 2024
Metagenomic profiling of antibiotic resistance genes and their associations with the bacterial community along the Kanda River, an urban river in JapanChang Xiao, Keigo Ide, Hiroko Matsunaga, et al.The ISME Journal|July 8, 2024
Large-scale single-virus genomics uncovers hidden diversity of river water viruses and diversified gene profilesYohei Nishikawa, Ryota Wagatsuma, Yuko Tsukada, et al.Frontiers in Immunology|April 1, 2021
Development of an Inflammatory CD14+ Dendritic Cell Subset in Humanized MiceRyutaro Iwabuchi, Keigo Ide, Kazutaka Terahara, et al.ISME Communications|November 8, 2023
Validation of the application of gel beads-based single-cell genome sequencing platform to soil and seawaterYohei Nishikawa, Masato Kogawa, Masahito Hosokawa, et al.Scientific Reports|November 14, 2022
Reproducible and sensitive micro-tissue RNA sequencing from formalin-fixed paraffin-embedded tissues for spatial gene expression analysisHiroko Matsunaga, Koji Arikawa, Miki Yamazaki, et al.Microbiome|December 12, 2022
Targeted single-cell genomics reveals novel host adaptation strategies of the symbiotic bacteria Endozoicomonas in Acropora tenuis coralKeigo Ide, Yohei Nishikawa, Toru Maruyama, et al.Cancer Science|November 20, 2022
Cells with stem-like properties are associated with the development of HPV18-positive cervical cancerMisako Kusakabe, Ayumi Taguchi, Michihiro Tanikawa, et al.Cancer Medicine|January 24, 2023
Application of organoid culture from HPV18-positive small cell carcinoma of the uterine cervix for precision medicineMisako Kusakabe, Ayumi Taguchi, Michihiro Tanikawa, et al.Pageof 1