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Ryuhei Harada

Showing results (31-40 of 95) with videos related to

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Journal of Chemical Theory and Computation|April 13, 2016
TaBoo SeArch Algorithm with a Modified Inverse Histogram for Reproducing Biologically Relevant Rare Events of ProteinsRyuhei Harada, Yu Takano, Yasuteru Shigeta
Journal of Chemical Theory and Computation|August 15, 2019
Nontargeted Parallel Cascade Selection Molecular Dynamics Using Time-Localized Prediction of Conformational Transitions in Protein DynamicsRyuhei Harada, Vladimir Sladek, Yasuteru Shigeta
Journal of Chemical Information and Modeling|November 8, 2019
Nontargeted Parallel Cascade Selection Molecular Dynamics Based on a Nonredundant Selection Rule for Initial Structures Enhances Conformational Sampling of ProteinsRyuhei Harada, Vladimir Sladek, Yasuteru Shigeta
The Journal of Physical Chemistry. B|November 11, 2021
Structural Variations of Metallothionein with or without Zinc Ions Elucidated by All-Atom Molecular Dynamics SimulationsRikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Materials (Basel, Switzerland)|February 25, 2022
Ligand Binding Path Sampling Based on Parallel Cascade Selection Molecular Dynamics: LB-PaCS-MDHayato Aida, Yasuteru Shigeta, Ryuhei Harada
Journal of Computational Chemistry|February 19, 2015
Enhanced conformational sampling method for proteins based on the TaBoo SeArch algorithm: application to the folding of a mini-protein, chignolinRyuhei Harada, Yu Takano, Yasuteru Shigeta
Yakugaku Zasshi : Journal of the Pharmaceutical Society of Japan|May 1, 2024
[Development of Membrane Permeability Coefficient by Means of Novel Molecular Dynamics Methods]Ryuhei Harada, Yuki Mitsuta, Yasuteru Shigeta
Journal of Computational Chemistry|April 23, 2014
On the induced-fit mechanism of substrate-enzyme binding structures of nylon-oligomer hydrolaseTakeshi Baba, Ryuhei Harada, Masayoshi Nakano, et al.
Journal of Molecular Graphics & Modelling|July 26, 2019
Parallel cascade selection molecular dynamics to screen for protein complexes generated by rigid dockingRyuhei Harada, Ryunosuke Yoshino, Hiroaki Nishizawa, et al.
Journal of Chemical Theory and Computation|August 19, 2021
Independent Nontargeted Parallel Cascade Selection Molecular Dynamics (Ino-PaCS-MD) to Enhance the Conformational Sampling of ProteinsTakunori Yasuda, Rikuri Morita, Yasuteru Shigeta, et al.
Pageof 10

Showing results (31-40 of 95) with videos related to

Sort By:
Pageof 10
Journal of Chemical Theory and Computation|April 13, 2016
TaBoo SeArch Algorithm with a Modified Inverse Histogram for Reproducing Biologically Relevant Rare Events of ProteinsRyuhei Harada, Yu Takano, Yasuteru Shigeta
Journal of Chemical Theory and Computation|August 15, 2019
Nontargeted Parallel Cascade Selection Molecular Dynamics Using Time-Localized Prediction of Conformational Transitions in Protein DynamicsRyuhei Harada, Vladimir Sladek, Yasuteru Shigeta
Journal of Chemical Information and Modeling|November 8, 2019
Nontargeted Parallel Cascade Selection Molecular Dynamics Based on a Nonredundant Selection Rule for Initial Structures Enhances Conformational Sampling of ProteinsRyuhei Harada, Vladimir Sladek, Yasuteru Shigeta
The Journal of Physical Chemistry. B|November 11, 2021
Structural Variations of Metallothionein with or without Zinc Ions Elucidated by All-Atom Molecular Dynamics SimulationsRikuri Morita, Yasuteru Shigeta, Ryuhei Harada
Materials (Basel, Switzerland)|February 25, 2022
Ligand Binding Path Sampling Based on Parallel Cascade Selection Molecular Dynamics: LB-PaCS-MDHayato Aida, Yasuteru Shigeta, Ryuhei Harada
Journal of Computational Chemistry|February 19, 2015
Enhanced conformational sampling method for proteins based on the TaBoo SeArch algorithm: application to the folding of a mini-protein, chignolinRyuhei Harada, Yu Takano, Yasuteru Shigeta
Yakugaku Zasshi : Journal of the Pharmaceutical Society of Japan|May 1, 2024
[Development of Membrane Permeability Coefficient by Means of Novel Molecular Dynamics Methods]Ryuhei Harada, Yuki Mitsuta, Yasuteru Shigeta
Journal of Computational Chemistry|April 23, 2014
On the induced-fit mechanism of substrate-enzyme binding structures of nylon-oligomer hydrolaseTakeshi Baba, Ryuhei Harada, Masayoshi Nakano, et al.
Journal of Molecular Graphics & Modelling|July 26, 2019
Parallel cascade selection molecular dynamics to screen for protein complexes generated by rigid dockingRyuhei Harada, Ryunosuke Yoshino, Hiroaki Nishizawa, et al.
Journal of Chemical Theory and Computation|August 19, 2021
Independent Nontargeted Parallel Cascade Selection Molecular Dynamics (Ino-PaCS-MD) to Enhance the Conformational Sampling of ProteinsTakunori Yasuda, Rikuri Morita, Yasuteru Shigeta, et al.
Pageof 10