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Journal of Theoretical Biology|February 4, 2014
Viral genome phylogeny based on Lempel-Ziv complexity and Hausdorff distanceChenglong Yu, Rong Lucy He, Stephen S-T YauPeerj|October 8, 2025
Reconstruction of masked sequences <i>via</i> inverse mapping of incomplete information natural vectorsPatrick Ding, Guoqing Hu, Hongyu Yu, et al.Genes|January 21, 2023
Generating Minimal Models of H1N1 NS1 Gene Sequences Using Alignment-Based and Alignment-Free AlgorithmsMeng Fang, Jiawei Xu, Nan Sun, et al.Scientific Reports|December 11, 2020
Amino acid torsion angles enable prediction of protein fold classificationKun Tian, Xin Zhao, Xiaogeng Wan, et al.BMC Bioinformatics|June 4, 2026
scKSFD: federated distillation model with knowledge sharing for cell type classification of clinical transcriptome dataNan Sun, Mengcen Guan, Piyu Zhou, et al.Frontiers in Genetics|April 27, 2019
A Novel Approach to Clustering Genome Sequences Using Inter-nucleotide CovarianceRui Dong, Lily He, Rong Lucy He, et al.Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases|November 5, 2019
A novel alignment-free method for HIV-1 subtype classificationLily He, Rui Dong, Rong Lucy He, et al.DNA and Cell Biology|December 16, 2016
Zika and Flaviviruses Phylogeny Based on the Alignment-Free Natural Vector MethodYongkun Li, Lily He, Rong Lucy He, et al.Molecular Phylogenetics and Evolution|March 2, 2016
A new method for studying the evolutionary origin of the SAR11 clade marine bacteriaXin Zhao, Xiaogeng Wan, Rong L He, et al.Journal of Theoretical Biology|June 8, 2017
A novel alignment-free vector method to cluster protein sequencesLily He, Yongkun Li, Rong Lucy He, et al.Pageof 9