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Environmental Microbiology|July 31, 2019
Improving eDNA-based protist diversity assessments using networks of amplicon sequence variantsDominik Forster, Guillaume Lentendu, Sabine Filker, et al.FEMS Microbiology Ecology|March 13, 2015
High diversity of protistan plankton communities in remote high mountain lakes in the European Alps and the Himalayan mountainsBarbara Kammerlander, Hans-Werner Breiner, Sabine Filker, et al.The Journal of Eukaryotic Microbiology|June 5, 2020
Perspectives from Ten Years of Protist Studies by High-Throughput MetabarcodingLuciana Santoferrara, Fabien Burki, Sabine Filker, et al.FEMS Microbiology Ecology|September 24, 2025
Functional stability despite structural changes in freshwater biofilm communities exposed to an antibiotic and an herbicide - the role of nutrient conditionsSophie Oster, Eric Bollinger, Verena C Schreiner, et al.Environmental Pollution (Barking, Essex : 1987)|July 16, 2025
Adaptation of methanogenic microbial assemblages to antibiotics: The role of resistance genes and taxonomic compositionEric Bollinger, Johanna Mayer, Foon Yin Lai, et al.Science China. Life Sciences|July 11, 2019
Spatio-temporal patterns of zooplankton in a main-stem dam affected tributary: a case study in the Xiangxi River of the Three Gorges Reservoir, ChinaXinghao Li, Jie Huang, Sabine Filker, et al.The Journal of Eukaryotic Microbiology|July 21, 2018
A Comparison of Different Ciliate Metabarcode Genes as Bioindicators for Environmental Impact Assessments of Salmon AquacultureDominik Forster, Sabine Filker, Rebecca Kochems, et al.Microbiologyopen|December 15, 2012
Environmental selection of protistan plankton communities in hypersaline anoxic deep-sea basins, Eastern Mediterranean SeaSabine Filker, Alexandra Stock, Hans-Werner Breiner, et al.Scientific Data|December 4, 2025
The Basque Coast Estuarine Sediment Gene CatalogueIon L Abad-Recio, Verena Rubel, Sabine Filker, et al.Microbial Ecology|August 8, 2018
Correction to: Glycine Betaine and Ectoine Are the Major Compatible Solutes Used by Four Different Halophilic Heterotrophic CiliatesLea Weinisch, Isabell Kirchner, Maria Grimm, et al.Pageof 5