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Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|March 10, 2021
TreeFix-TP: Phylogenetic Error-Correction for Infectious Disease Transmission Network InferenceSamuel Sledzieski, Chengchen Zhang, Ion Mandoiu, et al.Bioinformatics (Oxford, England)|April 25, 2018
RANGER-DTL 2.0: rigorous reconstruction of gene-family evolution by duplication, transfer and lossMukul S Bansal, Manolis Kellis, Misagh Kordi, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|September 9, 2011
Detecting highways of horizontal gene transferMukul S Bansal, Guy Banay, J Peter Gogarten, et al.Bioinformatics (Oxford, England)|May 14, 2008
DupTree: a program for large-scale phylogenetic analyses using gene tree parsimonyAndré Wehe, Mukul S Bansal, J Gordon Burleigh, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|July 13, 2021
TNet: Transmission Network Inference Using Within-Host Strain Diversity and its Application to Geographical Tracking of COVID-19 SpreadSaurav Dhar, Chengchen Zhang, Ion I Mandoiu, et al.Genome Research|December 7, 2013
Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent treesYi-Chieh Wu, Matthew D Rasmussen, Mukul S Bansal, et al.Algorithms for Molecular Biology : AMB|February 26, 2010
Robinson-Foulds supertreesMukul S Bansal, J Gordon Burleigh, Oliver Eulenstein, et al.Bioinformatics (Oxford, England)|December 7, 2014
Improved gene tree error correction in the presence of horizontal gene transferMukul S Bansal, Yi-Chieh Wu, Eric J Alm, et al.Systematic Biology|September 6, 2012
TreeFix: statistically informed gene tree error correction using species treesYi-Chieh Wu, Matthew D Rasmussen, Mukul S Bansal, et al.Bioinformatics (Oxford, England)|June 17, 2014
Pareto-optimal phylogenetic tree reconciliationRan Libeskind-Hadas, Yi-Chieh Wu, Mukul S Bansal, et al.Pageof 5