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Bioinformatics (Oxford, England)|July 27, 2024
BELHD: improving biomedical entity linking with homonym disambiguationSamuele Garda, Ulf LeserBioinformatics (Oxford, England)|November 17, 2023
BELB: a biomedical entity linking benchmarkSamuele Garda, Leon Weber-Genzel, Robert Martin, et al.Medizinische Genetik : Mitteilungsblatt Des Berufsverbandes Medizinische Genetik E.V|June 5, 2024
Public data sources for regulatory genomic featuresSamuele Garda, Jana Marie Schwarz, Markus Schuelke, et al.Database : the Journal of Biological Databases and Curation|November 18, 2022
Chemical-protein relation extraction with ensembles of carefully tuned pretrained language modelsLeon Weber, Mario Sänger, Samuele Garda, et al.Database : the Journal of Biological Databases and Curation|June 27, 2022
RegEl corpus: identifying DNA regulatory elements in the scientific literatureSamuele Garda, Freyda Lenihan-Geels, Sebastian Proft, et al.Bioinformatics (Oxford, England)|September 20, 2024
HunFlair2 in a cross-corpus evaluation of biomedical named entity recognition and normalization toolsMario Sänger, Samuele Garda, Xing David Wang, et al.Scientific Reports|July 5, 2019
Estimation of Transcription Factor Activity in Knockdown StudiesSaskia Trescher, Ulf LeserIEEE/ACM Transactions on Computational Biology and Bioinformatics|February 14, 2014
FRESCO: Referential compression of highly similar sequencesSebastian Wandelt, Ulf LeserPageof 9