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Plos Computational Biology|February 3, 2026
BiCLUM: Bilateral contrastive learning for unpaired single-cell multi-omics integrationYin Guo, Izaskun Mallona, Mark D Robinson, et al.Family Medicine|June 12, 2019
Residency Faculty Teaching Evaluation: What Do Faculty, Residents, and Program Directors Want?Linda Myerholtz, Alfred Reid, Hannah M Baker, et al.Family Medicine|February 4, 2015
Tackling the triple aim in primary care residencies: the I3 POP CollaborativeKatrina E Donahue, Alfred Reid, Ann Lefebvre, et al.Family Medicine|July 16, 2011
Improving chronic illness care in teaching practices: learnings from the I³ collaborativeWarren Newton, Elizabeth Baxley, Alfred Reid, et al.Communications Biology|May 18, 2019
diffcyt: Differential discovery in high-dimensional cytometry via high-resolution clusteringLukas M Weber, Malgorzata Nowicka, Charlotte Soneson, et al.BMC Bioinformatics|November 15, 2002
FunSpec: a web-based cluster interpreter for yeastMark D Robinson, Jörg Grigull, Naveed Mohammad, et al.Current Opinion in Microbiology|November 24, 2004
Transcriptional networks: reverse-engineering gene regulation on a global scaleGordon Chua, Mark D Robinson, Quaid Morris, et al.Current Opinion in Microbiology|September 29, 2004
The promise of functional genomics: completing the encyclopedia of a cellTimothy R Hughes, Mark D Robinson, Nicholas Mitsakakis, et al.Nucleic Acids Research|September 27, 2025
On metrics for subpopulation detection in single-cell and spatial omics dataSiyuan Luo, Pierre-Luc Germain, Ferdinand von Meyenn, et al.Genome Biology|August 9, 2017
stageR: a general stage-wise method for controlling the gene-level false discovery rate in differential expression and differential transcript usageKoen Van den Berge, Charlotte Soneson, Mark D Robinson, et al.Pageof 21