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Genome Biology and Evolution|June 22, 2022
Variation in the Substitution Rates among the Human Mitochondrial Haplogroup U SublineagesSanni Översti, Jukka U Palo
Virus Evolution|December 18, 2023
Reconstructing relative transmission rates in Bayesian phylodynamics: Two-fold transmission advantage of Omicron in Berlin, Germany during December 2021Ariane Weber, Sanni Översti, Denise Kühnert
Molecular Biology and Evolution|June 2, 2026
The phylodynamic threshold of measurably evolving populationsAriane Weber, Julia Kende, Camila Duitama González, et al.
Virus Evolution|October 1, 2025
Phylogenetic meta-analysis of persistent SARS-CoV-2 infections in immunocompromised individuals highlights the challenges of robust evolutionary rate estimation caused by low genetic diversitySanni Översti, Emily Gaul, Björn-Erik Ole Jensen, et al.
Journal of Virology|July 16, 2026
From sites to structure to serology: a roadmap for structure-aware molecular evolution of antigenically evolving virusesSanni Översti, Spyros Lytras, Shusuke Kawakubo, et al.
Scientific Reports|July 23, 2017
Identification and analysis of mtDNA genomes attributed to Finns reveal long-stagnant demographic trends obscured in the total diversitySanni Översti, Päivi Onkamo, Monika Stoljarova, et al.
Plos One|July 2, 2015
Vestiges of an Ancient Border in the Contemporary Genetic Diversity of North-Eastern EuropeAnu M Neuvonen, Mikko Putkonen, Sanni Översti, et al.
Plos Computational Biology|March 16, 2026
Fast hospital discharge rates blur within-hospital 'transmission footprint' in bacterial genomes, as showcased with Staphylococcus aureusSanni Översti, Mathilde Boumasmoud, Huldyrch F Günthard, et al.
Nature Communications|June 20, 2024
Importations of SARS-CoV-2 lineages decline after nonpharmaceutical interventions in phylogeographic analysesSama Goliaei, Mohammad-Hadi Foroughmand-Araabi, Aideen Roddy, et al.
Bioinformatics and Biology Insights|March 13, 2025
Evolutionary and epidemic dynamics of COVID-19 in Germany exemplified by three Bayesian phylodynamic case studiesSanni Översti, Ariane Weber, Viktor Baran, et al.
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