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IEEE/ACM Transactions on Computational Biology and Bioinformatics|September 11, 2015
A Property-Driven Methodology for Formal Analysis of Synthetic Biology SystemsSavas Konur, Marian GheorgheBioinformatics Advances|April 4, 2024
BioNexusSentinel: a visual tool for bioregulatory network and cytohistological RNA-seq genetic expression profiling within the context of multicellular simulation research using ChatGPT-augmented software engineeringRichard Oliver Matzko, Savas KonurJournal of the Royal Society, Interface|May 9, 2023
Verifiable biologySavas Konur, Marian Gheorghe, Natalio KrasnogorGenes|January 21, 2023
Novel Ground-Up 3D Multicellular Simulators for Synthetic Biology CAD Integrating Stochastic Gillespie Simulations Benchmarked with Topologically Variable SBML ModelsRichard Oliver Matzko, Laurentiu Mierla, Savas KonurCancers|March 19, 2020
Model-Based Integration Analysis Revealed Presence of Novel Prognostic miRNA Targets and Important Cancer Driver Genes in Triple-Negative Breast CancersMasood Zaka, Chris W Sutton, Yonghong Peng, et al.Bioinformatics (Oxford, England)|April 25, 2018
Automatic selection of verification tools for efficient analysis of biochemical modelsMehmet Emin Bakir, Savas Konur, Marian Gheorghe, et al.ACS Synthetic Biology|August 5, 2014
Qualitative and quantitative analysis of systems and synthetic biology constructs using P systemsSavas Konur, Marian Gheorghe, Ciprian Dragomir, et al.ACS Synthetic Biology|August 2, 2021
Toward Full-Stack In Silico Synthetic Biology: Integrating Model Specification, Simulation, Verification, and Biological CompilationSavas Konur, Laurentiu Mierla, Harold Fellermann, et al.Pageof 1