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Scientific Reports|February 3, 2021
Bacterial associations in the healthy human gut microbiome across populationsMark Loftus, Sayf Al-Deen Hassouneh, Shibu YoosephFrontiers in Microbiology|August 5, 2021
Linking Inflammatory Bowel Disease Symptoms to Changes in the Gut Microbiome Structure and FunctionSayf Al-Deen Hassouneh, Mark Loftus, Shibu YoosephBMC Microbiology|April 1, 2021
Bacterial community structure alterations within the colorectal cancer gut microbiomeMark Loftus, Sayf Al-Deen Hassouneh, Shibu YoosephMicroorganisms|May 25, 2024
Improving Bacterial Metagenomic Research through Long-Read SequencingNoah Greenman, Sayf Al-Deen Hassouneh, Latifa S Abdelli, et al.Nucleic Acids Research|February 26, 2013
SPA: a short peptide assembler for metagenomic dataYoungik Yang, Shibu YoosephJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|May 13, 2022
Variational Approximation-Based Model Selection for Microbial Network InferenceShibu Yooseph, Sahar TavakoliBioinformatics (Oxford, England)|September 13, 2019
Learning a mixture of microbial networks using minorization-maximizationSahar Tavakoli, Shibu YoosephFrontiers in Microbiomes|March 19, 2026
Impact of propionic acid-rich diets on microbial composition of the murine gut microbiomeNoah Greenman, Latifa S Abdelli, Sayf Al-Deen Hassouneh, et al.Methods in Molecular Biology (Clifton, N.J.)|December 7, 2011
From bacterial to microbial ecosystems (metagenomics)Shannon J Williamson, Shibu YoosephScientific Reports|July 12, 2023
Antigen test swabs are comparable to nasopharyngeal swabs for sequencing of SARS-CoV-2Sayf Al-Deen Hassouneh, Alexa Trujillo, Sobur Ali, et al.Pageof 10