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Plos Computational Biology|March 29, 2014
Investigation of inflammation and tissue patterning in the gut using a Spatially Explicit General-purpose Model of Enteric Tissue (SEGMEnT)Chase Cockrell, Scott Christley, Gary AnComputation (Basel, Switzerland)|November 12, 2021
Computational Studies of the Intestinal Host-Microbiota InteractomeScott Christley, Chase Cockrell, Gary AnPlos One|March 26, 2015
Towards anatomic scale agent-based modeling with a massively parallel spatially explicit general-purpose model of enteric tissue (SEGMEnT_HPC)Robert Chase Cockrell, Scott Christley, Eugene Chang, et al.Viruses|August 28, 2021
Comparative Computational Modeling of the Bat and Human Immune Response to Viral Infection with the Comparative Biology Immune Agent Based ModelChase Cockrell, Gary AnFrontiers in Systems Biology|August 14, 2025
Generating synthetic multidimensional molecular time series data for machine learning: considerationsGary An, Chase CockrellJournal of Theoretical Biology|July 22, 2017
Sepsis reconsidered: Identifying novel metrics for behavioral landscape characterization with a high-performance computing implementation of an agent-based modelChase Cockrell, Gary AnFrontiers in Physiology|June 7, 2021
Utilizing the Heterogeneity of Clinical Data for Model Refinement and Rule Discovery Through the Application of Genetic Algorithms to Calibrate a High-Dimensional Agent-Based Model of Systemic InflammationChase Cockrell, Gary AnFrontiers in Systems Biology|August 8, 2022
Drug Development Digital Twins for Drug Discovery, Testing and Repurposing: A Schema for Requirements and DevelopmentGary An, Chase CockrellPlos Computational Biology|February 16, 2018
Examining the controllability of sepsis using genetic algorithms on an agent-based model of systemic inflammationRobert Chase Cockrell, Gary AnPageof 17