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The Journal of Chemical Physics|February 22, 2024
Designing 3D multicomponent self-assembling systems with signal-passing building blocksJoshua Evans, Petr ŠulcNature Communications|March 26, 2021
Hinge-shift mechanism as a protein design principle for the evolution of β-lactamases from substrate promiscuity to specificityTushar Modi, Valeria A Risso, Sergio Martinez-Rodriguez, et al.Physical Biology|December 8, 2011
Local and non-local native topologies reveal the underlying folding landscape of proteinsTaisong Zou, S Banu OzkanBiophysical Journal|August 3, 2025
Coarse-grained RNA model for the Martini 3 force fieldDanis Yangaliev, S Banu OzkanEntropy (Basel, Switzerland)|December 8, 2020
Allostery and Epistasis: Emergent Properties of Anisotropic NetworksPaul Campitelli, S Banu OzkanJournal of Computational Chemistry|January 22, 2004
Conformational search of peptides and proteins: Monte Carlo minimization with an adaptive bias method applied to the heptapeptide deltorphinS Banu Ozkan, Hagai MeirovitchJournal of Chemical Information and Modeling|March 15, 2016
Adaptive BP-Dock: An Induced Fit Docking Approach for Full Receptor FlexibilityAshini Bolia, S Banu OzkanSoft Matter|January 5, 2021
Coarse-grained nucleic acid-protein model for hybrid nanotechnologyJonah Procyk, Erik Poppleton, Petr ŠulcBiophysical Journal|March 23, 2010
Union of geometric constraint-based simulations with molecular dynamics for protein structure predictionTyler J Glembo, S Banu OzkanPlos Computational Biology|October 15, 2011
Change in allosteric network affects binding affinities of PDZ domains: analysis through perturbation response scanningZ Nevin Gerek, S Banu OzkanPageof 15