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Bioinformatics Advances|July 3, 2023
<i>snHiC</i>: a complete and simplified snakemake pipeline for grouped Hi-C data analysisSebastian Gregoricchio, Wilbert Zwart
BMC Bioinformatics|August 18, 2021
CHIPIN: ChIP-seq inter-sample normalization based on signal invariance across transcriptionally constant genesLélia Polit, Gwenneg Kerdivel, Sebastian Gregoricchio, et al.
NAR Genomics and Bioinformatics|February 13, 2026
<i>DEprot</i>: a comprehensive R-package for the analysis of label-free quantitation mass spectrometry dataNils Eickhoff, Liesbeth Hoekman, Onno Bleijerveld, et al.
Oncogene|August 12, 2023
FANCA deficiency promotes leukaemic progression by allowing the emergence of cells carrying oncogenic driver mutationsPatrycja Pawlikowska, Laure Delestré, Sebastian Gregoricchio, et al.
Communications Biology|July 11, 2025
TRIM33 loss reduces androgen receptor transcriptional output and H2BK120 ubiquitinationNils Eickhoff, Janina Janetzko, Nuno Padrão, et al.
Genome Research|June 10, 2025
Comprehensive functional annotation of ESR1-driven enhancers in breast cancer reveals hierarchical activity independent of genomic and epigenomic contextsYanis Zekri, Sebastian Gregoricchio, Elif Yapıcı, et al.
Iscience|September 2, 2025
A 3D genome compendium of breast cancer progressionTeun van den Brand, Maria Donaldson Collier, Koen D Flach, et al.
Nucleic Acids Research|July 2, 2024
Chromatin context-dependent effects of epigenetic drugs on CRISPR-Cas9 editingRuben Schep, Max Trauernicht, Xabier Vergara, et al.
Nucleic Acids Research|July 24, 2022
HDAC1 and PRC2 mediate combinatorial control in SPI1/PU.1-dependent gene repression in murine erythroleukaemiaSebastian Gregoricchio, Lélia Polit, Michela Esposito, et al.
Proceedings of the National Academy of Sciences of the United States of America|August 15, 2025
TRIM24 as a therapeutic target in endocrine treatment-resistant breast cancerNuno Padrão, Sebastian Gregoricchio, Nils Eickhoff, et al.
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