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Proceedings of the National Academy of Sciences of the United States of America|December 3, 2016
Genomic sequencing-based mutational enrichment analysis identifies motility genes in a genetically intractable gut microbeSena Bae, Olaf Mueller, Sandi Wong, et al.Gut Microbes|August 20, 2024
Chronic binge drinking-induced susceptibility to colonic inflammation is microbiome-dependentDiogo Fonseca-Pereira, Sena Bae, Monia Michaud, et al.Plos Computational Biology|April 17, 2015
A power-law dependence of bacterial invasion on mammalian host receptorsTae J Lee, Jeffrey Wong, Sena Bae, et al.Cell Reports|March 22, 2025
The metabolic sensor LKB1 regulates ILC3 homeostasis and mitochondrial functionDiogo Fonseca-Pereira, Sena Bae, Slater L Clay, et al.Microbiome|January 22, 2021
Whole microbial community viability is not quantitatively reflected by propidium monoazide sequencing approachYa Wang, Yan Yan, Kelsey N Thompson, et al.Cell Host & Microbe|August 19, 2022
Faecalibaculum rodentium remodels retinoic acid signaling to govern eosinophil-dependent intestinal epithelial homeostasisY Grace Cao, Sena Bae, Jannely Villarreal, et al.Gut Microbes|November 16, 2021
<i>Fusobacterium nucleatum</i> drives a pro-inflammatory intestinal microenvironment through metabolite receptor-dependent modulation of IL-17 expressionCaitlin A Brennan, Slater L Clay, Sydney L Lavoie, et al.Immunity|October 20, 2019
Metabolite-Sensing Receptor Ffar2 Regulates Colonic Group 3 Innate Lymphoid Cells and Gut ImmunityEunyoung Chun, Sydney Lavoie, Diogo Fonseca-Pereira, et al.Nature Microbiology|August 18, 2022
A biosynthetic pathway for the selective sulfonation of steroidal metabolites by human gut bacteriaLina Yao, Gabriel D D'Agostino, Jinseok Park, et al.Nature Biotechnology|October 15, 2025
Predicting functions of uncharacterized gene products from microbial communitiesYancong Zhang, Amrisha Bhosle, Sena Bae, et al.Pageof 3