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Bioinformatics (Oxford, England)|July 23, 2025
Reducing redundancy and enhancing accuracy through a phylogenetically-informed microbial community metabolic modeling approachSepideh Mofidifar, Mojtaba TefaghPlos Computational Biology|June 20, 2024
GEM-based computational modeling for exploring metabolic interactions in a microbial communitySoraya Mirzaei, Mojtaba TefaghPhysics in Medicine and Biology|February 24, 2023
Built-in wavelet-induced smoothness to reduce plan complexity in intensity modulated radiation therapy (IMRT)Mojtaba Tefagh, Masoud ZarepishehBMC Bioinformatics|May 25, 2026
MOFA: microbial optimization without forced altruismSoraya Mirzaei, Mojtaba TefaghJournal of Theoretical Biology|April 23, 2014
A mathematical approach to emergent properties of metabolic networks: partial coupling relations, hyperarcs and flux ratiosSayed-Amir Marashi, Mojtaba TefaghJournal of Mathematical Biology|December 12, 2018
Quantitative flux coupling analysisMojtaba Tefagh, Stephen P BoydBMC Bioinformatics|April 16, 2020
SWIFTCORE: a tool for the context-specific reconstruction of genome-scale metabolic networksMojtaba Tefagh, Stephen P BoydMedical Physics|March 8, 2025
Compressed radiotherapy treatment planning: A new paradigm for rapid and high-quality treatment planning optimizationMojtaba Tefagh, Gourav Jhanwar, Masoud ZarepishehHelicobacter|April 14, 2024
A reconstructed genome-scale metabolic model of Helicobacter pylori for predicting putative drug targets in clarithromycin and rifampicin resistance conditionsSepideh Mofidifar, Abbas Yadegar, Mohammad Hossein Karimi-JafariBiogerontology|January 17, 2018
Repurposing existing drugs for new AMPK activators as a strategy to extend lifespan: a computer-aided drug discovery studySepideh Mofidifar, Farzin Sohraby, Milad Bagheri, et al.Pageof 2